Job Description P40876 Confidence 19.85% Date Thu Jan 5 12:01:18 GMT 2012 Rank 65 Aligned Residues 102 % Identity 11% Template c3ginB_ PDB info PDB header:metal binding protein Chain: B: PDB Molecule:sodium/calcium exchanger 1; PDBTitle: crystal structure of e454k-cbd1 Resolution 2.40 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																										.				.	.
Query SS confidence																										.				.	.
Query Sequence		V	V	V	G	G	T	R	F	I	F	P	A	D	R	E	S	I	S	I	L	L	T	N	T	.	S	Q	E	.	.	S	W	L	I	N	S	K	I	N	R	P	T	R	W	A	G	G	E	A	S	T	V	P	A	P	L	L	A	A	P	P	L	I	L	L	K	P	G	T	T	G	T	L	R	L	L	R	T	E	S
Query Conservation																										.				.	.
Alig confidence																										.				.	.																			.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.
Template Sequence		I	F	F	E	Q	G	T	Y	Q	C	L	E	N	C	G	T	V	A	L	T	I	I	R	R	G	G	D	L	T	N	T	V	F	V	D	F	R	T	E	D	G	T	A	N	A	G	S	D	.	.	.	.	.	.	.	Y	E	F	T	E	G	T	V	V	F	K	P	G	E	T	Q	K	E	I	R	V	G	I	I	D
Template Known Secondary structure					S		S						T	T	S	S										S	S		T	T	S											S	S	S		B	T	T	T	.	.	.	.	.	.	.	B											T	T										B
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.								.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		D	I	L	P	V	D	R	E	T	L	F	E	L	S	I	A	S	V	P	S	G	K	.	.	.	V	E	N	Q	S	V	K	V	A	M	R
Query Conservation																								.	.	.
Alig confidence										.														.	.	.
Template Conservation										.
Template Sequence		D	D	I	F	E	E	D	K	.	N	F	L	V	H	L	S	N	V	K	V	S	L	A	C	L	G	S	P	S	T	A	T	V	T	I	F
Template Known Secondary structure			S							.																		S
Template Predicted Secondary structure										.
Template SS confidence
		447	.	.	450	.	.	.	.		.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions