Job Description P40876 Confidence 22.51% Date Thu Jan 5 12:01:18 GMT 2012 Rank 63 Aligned Residues 157 % Identity 15% Template c3fcsA_ PDB info PDB header:cell adhesion/blood clotting Chain: A: PDB Molecule:integrin, alpha 2b; PDBTitle: structure of complete ectodomain of integrin aiibb3 Resolution 2.55 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	V	V	G	G	T	R	F	I	F	P	A	D	R	E	S	I	.	S	I	L	L	T	N	T	S	Q	E	S	W	L	I	N	S	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	P	T	R	W	A	G	G	E	A	S	T	V	P	A	P	L	L	A	A	P	P	L	I	L
Query Conservation																				.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		T	A	S	V	T	G	S	P	L	L	V	G	A	D	N	V	L	E	L	Q	M	D	A	A	N	E	G	E	G	A	Y	E	A	E	L	A	V	H	L	P	Q	G	A	H	Y	M	R	A	L	S	N	V	E	F	E	R	L	I	C	N	Q	K	K	E	N	E	T	R	V	V	L	C	E	L	G	N	P	.	.	.
Template Known Secondary structure							S		S			T	T	S														S	S		B	T	T									T	T											.			B								S	S	S	S									T	T	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	P	G	T	T	G	T	L	R	L	L	R	T	E	S	D	I	L	P	V	D	R	E	T	L	F	E	L	S	I	A	S	V	P	S	G	K	V	E	N	Q	S	V	K	V	A	M	R	S	V	F	K	L	F	W	R	P	E	G	L	P	G	D	P	L	E	A	Y	Q	Q	L	R	W	T	R	N	S	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	K	N	A	Q	I	G	I	A	M	L	V	S	V	G	N	L	E	E	A	G	E	S	V	S	F	Q	L	Q	I	R	S	K	N	S	Q	N	P	N	S	K	I	V	L	L	D	V	P	V	R	A	E	A	Q	V	E	L	R	G	N	S	F	P	A	S	L	V	V	A	A	S	W	G	P	K	V	E	H	T
Template Known Secondary structure		B		T	T															T	T			S													S	S	S		S																								S	S
Template Predicted Secondary structure
Template SS confidence
		693	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	L	T	N	P	T	P	Y	Y	I	N	L	I	Q	V	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	L	H	N	N	G	P	G	T	V	N	G	L	H	L	S	I
Template Known Secondary structure								S	S	S
Template Predicted Secondary structure
Template SS confidence
		784	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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