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Job Description | P40876 | Confidence | 33.25% | Date | Thu Jan 5 12:01:18 GMT 2012 |
Rank | 51 | Aligned Residues | 109 |
% Identity | 11% | Template | c2qvkA_ |
PDB info |
PDB header:metal binding protein | Chain: A: PDB Molecule:sodium/calcium exchanger 1; |
PDBTitle: the second ca2+-binding domain of the na+-ca2+ exchanger is2 essential for regulation: crystal structures and3 mutational analysis
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Resolution | 1.45 Å |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Q | A | G | V | . |
V | V | G | G | T | R | F | I | F | P | A | D | R | E | S | I | S | I | L | L | T | N | T | S | Q | E | S | W | L | I | N | S | K | I | N | R | P | T | R | W | A | G | G | E | A | S | T | V | P | A | P | L | L | A | A | P | P | L | I | L | L | K | P | G | T | T | G | T | L | R | L | L | R | T | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
H | A | G | I | F | T | F | E | E | P | V | T | H | V | S | E | S | I | G | I | M | E | V | K | V | L | R | T | S | G | A | R | G | N | V | I | V | P | Y | K | T | I | E | G | T | A | R | G | G | G | . |
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E | D | F | E | D | T | C | G | E | L | E | F | Q | N | D | E | I | V | K | T | I | S | V | K | V | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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501 | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | |
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104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | D | I | L | P | V | D | R | E | T | L | F | E | L | S | I | A | S | V | . |
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P | S | G | K | V | E | N | Q | S | V | K | V | A | M | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | D | E | E | Y | E | K | N | K | T | F | F | L | E | I | G | E | P | R | L | V | E | G | R | P | I | L | G | E | H | T | K | L | E | V | I | I | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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577 | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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