Job Description P40876 Confidence 97.33% Date Thu Jan 5 12:01:18 GMT 2012 Rank 20 Aligned Residues 168 % Identity 14% Template c2qsvA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein of unknown function from porphyromonas2 gingivalis w83 Resolution 2.10 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		A	G	V	V	V	G	G	T	R	F	I	F	P	.	.	.	.	A	D	R	E	S	I	S	I	L	L	T	N	T	S	Q	E	S	W	L	I	N	S	K	I	N	R	P	T	R	W	A	G	G	E	A	S	T	V	P	A	P	L	L	A	A	P	P	L	I	L	L	K	P	G	T	T	G	T	L	R	L	L	R
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	L	Q	V	S	N	A	R	L	L	F	P	I	S	X	P	E	D	E	G	V	V	R	L	V	V	N	N	T	D	E	S	D	L	Q	V	A	V	V	S	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	V	S	L	D	D	R	A	F	R	L	Q	A	R	E	P	R	E	L	N	L	S	L
Template Known Secondary structure							S		S						S	B		T	T													S	S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	T	T				S								S	S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.														.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.
Query Sequence		T	E	S	D	I	L	P	V	D	R	E	T	L	F	E	L	S	I	A	S	V	P	S	G	K	V	E	N	Q	S	V	K	V	A	M	R	S	V	F	K	L	F	W	R	P	E	G	L	P	G	D	P	L	E	A	Y	Q	Q	L	R	W	T	R	N	S	Q	G	.	.	.	.	.	.	V	Q	L	T	N	P	T
Query Conservation																																																																					.	.	.	.	.	.
Alig confidence											.																																																										.	.	.	.	.	.
Template Conservation											.
Template Sequence		A	V	P	R	N	X	P	P	G	.	X	K	D	E	P	L	V	L	E	V	T	S	P	E	T	G	K	K	A	V	D	S	V	X	V	S	L	P	L	V	D	N	F	P	A	L	T	A	A	Q	T	G	V	X	E	L	S	T	Y	L	D	X	G	Q	L	D	G	E	T	T	K	A	A	I	E	I	R	N	V	G
Template Known Secondary structure					T	T			S		.													T	T	T																		G	G	G			G	G	G																T	T	S												S
Template Predicted Secondary structure											.
Template SS confidence
		68	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		P	Y	Y	I	N	L	I	Q	V	S	V	N	G	K	A	L	S	.	.	.	N	V	G	V	V	P	P	K	S	Q	R	Q	T	S	W
Query Conservation																			.	.	.
Alig confidence																			.	.	.
Template Conservation
Template Sequence		A	G	P	L	R	L	H	S	V	T	T	R	N	P	A	L	T	A	V	P	D	R	T	E	I	K	P	G	G	S	T	L	L	R	I
Template Known Secondary structure		S	S											S	T	T						S		S				T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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