Job Description P40876 Confidence 24.02% Date Thu Jan 5 12:01:18 GMT 2012 Rank 62 Aligned Residues 102 % Identity 21% Template c1yewI_ PDB info PDB header:oxidoreductase, membrane protein Chain: I: PDB Molecule:particulate methane monooxygenase, b subunit; PDBTitle: crystal structure of particulate methane monooxygenase Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.																														.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	N	T	W	N	R	L	A	L	L	I	F	A	V	L	S	L	L	V	A	G	E	L	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	V	V	G	G	T	R	F	I	F	P	A	D	R	E	S	I	S	I	L	L	T	N	T
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	A	T	D	R	K	V	A	M	G	F	L	A	A	T	I	L	I	V	V	M	A	M	S	S	A	N	S	K	Y	P	I	T	I	P	L	Q	A	G	T	M	R	G	M	K	P	L	E	L	P	A	P	T	V	S	V	K	V	E	D	A	T	Y	R	V	P	G	R	A	M	R	M	K	L	T	I	T	N	H
Template Known Secondary structure		S		T	T																										S	S											B												S												S	S		S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		52	.	.	.	.	.	.	.	60	.	.	.	.											.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	E	S	W	L	I	N	S	K	I	N	R	.	.	.	.	.	.	.	.	.	.	P	T	R	W	A	G	G	E	A	S	T	V	P	A	P	L	L	A	A	P	P	L	I	L	L	K	P	G	T	T	G	T	L	R	L	L	R	T	E
Query Conservation															.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																															.
Template Sequence		G	N	S	P	I	R	L	G	E	F	Y	T	A	S	V	R	F	L	D	S	D	V	Y	K	D	T	T	G	Y	P	E	D	L	L	A	E	D	G	L	S	V	S	D	N	S	.	P	L	A	P	G	E	T	R	T	V	D	V	T	A	S	D
Template Known Secondary structure		S	S	S										S	S						T	T	T					S				G	G	G			T	T					S			S	.		B		T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions