Job Description P40876 Confidence 100.00% Date Thu Jan 5 12:01:18 GMT 2012 Rank 5 Aligned Residues 190 % Identity 29% Template c1qpxA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:papd chaperone; PDBTitle: crystal structures of self-capping papd chaperone homodimers Resolution 2.40 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		G	V	V	V	G	G	T	R	F	I	F	P	A	D	R	E	S	I	S	I	L	L	T	N	T	S	Q	E	.	S	W	L	I	N	S	K	I	N	R	P	T	R	W	A	G	G	E	A	S	T	V	P	A	P	L	L	A	A	P	P	L	I	L	L	K	P	G	T	T	G	T	L	R	L	L	R	T	E	S	D
Query Conservation																														.
Alig confidence																														.											.	.	.	.	.
Template Conservation																																									.	.	.	.	.
Template Sequence		A	V	S	L	D	R	T	R	A	V	F	D	G	S	E	K	S	M	T	L	D	I	S	N	D	N	K	Q	L	P	Y	L	A	Q	A	W	I	E	N	.	.	.	.	.	E	N	Q	E	K	I	I	T	G	P	V	I	A	T	P	P	V	Q	R	L	D	P	G	A	K	S	M	V	R	L	S	T	T	P	D	I
Template Known Secondary structure						S		S						T	T	S	S											S	S	S											.	.	.	.	.	T	T	S				S	S	S	S					S	S						T	T											G	G	G
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
			106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure		.																																																						.
Query SS confidence		.																																																						.
Query Sequence		.	I	L	P	V	D	R	E	T	L	F	E	L	S	I	A	S	V	P	S	G	K	V	E	N	Q	S	V	K	V	A	M	R	S	V	F	K	L	F	W	R	P	E	G	L	P	G	D	P	L	E	A	Y	Q	.	Q	L	R	W	T	R	N	S	Q	G	V	Q	L	T	N	P	T	P	Y	Y	I	N	L	I	Q
Query Conservation		.																																																						.
Alig confidence		.																				.	.	.	.	.	.	.	.	.																										.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		S	K	L	P	Q	D	R	E	S	L	F	Y	F	N	L	R	E	I	P	P	.	.	.	.	.	.	.	.	.	I	A	L	C	T	K	I	K	L	F	Y	R	P	A	A	I	K	T	R	P	N	E	V	W	Q	D	Q	L	I	L	N	K	V	S	G	G	Y	R	I	E	N	P	T	P	Y	Y	V	T	V	I	G
Template Known Secondary structure		G	G	S		S	S	S														.	.	.	.	.	.	.	.	.														G	G	G				T	T				G	G	G							T	T								S	S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.										.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		V	S	V	N	G	K	A	L	S	.	.	.	.	N	V	G	V	V	P	P	K	S	Q	R	Q	T	S	W	C	Q	A	I	A	P	C	H	V	A	W	R	A	I	N	D	Y	G	G	L	S	A	K	K	E	Q
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																	.	.	.
Template Conservation																															.	.	.
Template Sequence		L	G	G	S	E	K	Q	A	E	E	G	E	F	E	T	V	M	L	S	P	R	S	E	Q	T	V	K	S	A	.	.	.	N	Y	N	T	P	Y	L	S	Y	I	N	D	Y	G	G	R	P	V	L	S	F	I
Template Known Secondary structure				S	S							S									T	T									.	.	.			S	S								T	T	S
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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