Job Description P40876 Confidence 62.56% Date Thu Jan 5 12:01:18 GMT 2012 Rank 38 Aligned Residues 65 % Identity 11% Template c1e9zA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:urease subunit alpha; PDBTitle: crystal structure of helicobacter pylori urease Resolution 3.00 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.																				.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	V	V	V	G	G	T	R	F	I	F	P	A	D	R	E	S	I	S	I	L	L	T	N	T	S	Q	E	S	W	L	I	N	S	K	I	N	R	P	T	R	W	A	G	G	E	A	S	T	V	P	A	P	L	L	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	L	F	L	K	N	E	D	I	T	I	N	E	G	K	K	A	V	S	V	K	V	K	N	V	G	D	R	P	V	Q	I	G	S	H	F	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	V	N	R	C	L	D	F	D	R	E	K	T	F	G	K	R	L	D	I	A	A	G	T	A
Template Known Secondary structure		T						S	S				T	T	S	S												S	S	S						T	T	S		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S		T	T			S						T	T					S	S	T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.																.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	L	K	P	G	T	T	G	T	L	R	L	L	R	T	E	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	F	E	P	G	E	E	K	S	V	E	L	I	D	I	G	G	N
Template Known Secondary structure						T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions