|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | D | Q | Q | T | F | R | D | A | M | S | C | M | G | A | A | V | N | I | I | T | T | D | G | P | A | G | R | A | G | F | T | A | S | A | V | C | S | V | T | D | T | P | P | T | L | L | V | C | L | N | R | G | A | S | V | W | P | A | F | N | E | N | R | T | L | C | V | N | T | L | S | A | G | Q | E | P | L | S | N |
Query Conservation |   |
  |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |
|
|   |   |
|
|   |
|   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |
|
|   |   |
|
|
|
|   |   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |
Template Sequence |   |
I | D | Q | R | T | F | R | R | V | L | G | Q | F | C | T | G | V | T | I | I | T | T | V | H | E | G | N | P | V | G | F | A | C | Q | S | F | A | A | L | S | L | D | P | P | L | V | L | F | C | P | T | K | V | S | R | S | W | K | A | I | E | A | S | G | R | F | C | V | N | I | L | H | E | K | Q | Q | H | V | S | A |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  | T | T | S |
|  |  |
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
|
|  |  |  |  |  | T | T | T | T |  |  |  |  |
|
| B | T | T |
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
| B | G | G | G |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
|
. | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |
|
|  |  |  |
|
|  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | F | G | G | K | T | P | M | E | H | R | F | A | A | A | R | W | Q | T | G | V | T | G | C | P | Q | L | E | E | A | L | V | S | F | D | C | R | I | S | Q | V | V | S | V | G | T | H | D | I | L | F | C | A | I | E | A | I | H | R | H | T | T | P | Y | . |
. |
G | L | V | W | F | D | R | S | Y | H | A | L | M | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   | . | . |
|
|   |
|   |   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   | . | . |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |
|   |   |   |   |
|
Template Sequence |   |
R | F | G | S | . |
. |
R | E | P | D | K | F | A | G | I | D | W | R | P | S | D | L | G | S | P | I | I | D | G | S | L | A | H | I | D | C | T | V | H | D | V | H | D | G | G | D | H | F | V | V | F | G | K | V | H | G | L | S | E | V | P | E | R | K | P | R | P | L | L | F | Y | R | G | E | Y | T | G | I | E | P |
Template Known Secondary structure |   |
 |  | T | S | . | . |
|
| S |
| T | T | T | T |
|
|  |  |  |
| S | S | S |
|  |  |  | T | T |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
|
|
| S |
| B |
|  |  |  | T | T |  |  |  |
|
|
| G |
Template Predicted Secondary structure |   |
 |  |
|
| . | . |
|
|
|  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | |
|
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
  |
  |   |
162 | . |
Predicted Secondary structure |   |
|
|
Query SS confidence |   |
|
|
Query Sequence |   |
P | A |
Query Conservation |   |
  |
|
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
E | K |
Template Known Secondary structure |   |
G | G |
Template Predicted Secondary structure |   |
|
|
Template SS confidence |   |
|
|
  |   |
164 | . |
  |