Job Description P75893 Confidence 100.00% Date Thu Jan 5 12:15:43 GMT 2012 Rank 20 Aligned Residues 155 % Identity 13% Template c2d5mA_ PDB info PDB header:electron transport Chain: A: PDB Molecule:flavoredoxin; PDBTitle: flavoredoxin of desulfovibrio vulgaris (miyazaki f) Resolution 1.05 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		V	D	Q	Q	T	F	R	D	A	M	S	C	M	G	A	A	V	N	I	I	T	T	D	G	P	A	G	.	R	A	G	F	T	A	S	A	V	C	S	V	T	D	T	P	P	T	L	L	V	C	L	N	R	G	A	S	V	W	P	A	F	N	E	N	R	T	L	C	V	N	T	L	S	A	G	Q	E	P	L	S
Query Conservation																													.
Alig confidence					.																								.
Template Conservation					.
Template Sequence		M	K	K	.	S	L	G	A	R	T	L	A	Y	P	T	P	L	F	L	V	G	T	Y	D	R	D	S	R	P	N	I	M	A	A	A	W	A	G	I	C	C	S	Q	P	P	S	I	A	V	S	L	R	K	A	T	Y	T	Y	R	S	I	T	E	R	G	A	F	T	I	S	I	P	S	R	A	Y	V	R	H	A
Template Known Secondary structure					.				S					S												T	T										S							T	T									T	T	S										S								B	G	G	G
Template Predicted Secondary structure					.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure												.														.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.														.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	F	G	G	K	T	P	M	E	.	H	R	F	A	A	A	R	W	Q	T	G	V	T	.	.	.	G	C	P	Q	L	E	E	A	L	V	S	F	D	C	R	I	S	Q	V	V	S	V	G	T	H	D	I	L	F	C	A	I	E	A	I	H	R	H	T	T	P	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.														.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.														.	.	.																					.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.
Template Sequence		D	Y	A	G	I	Y	S	G	E	N	E	D	K	F	A	S	L	G	L	T	P	V	P	G	E	H	V	D	A	P	Y	V	G	E	F	P	M	A	I	E	L	K	L	I	H	Q	I	.	.	.	E	H	T	Q	F	I	G	E	I	M	D	V	K	V	D	E	S	C	L	R	D	D	G	L	P	D	I	N	K	V
Template Known Secondary structure					T	T	S		S	T	T								T							S	S	S	S	S				T	T	S	S												.	.	.																G	G	G	B		T	T	S	S	B
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		147	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		Y	G	L	V	W	F	.	.	D	R	S	Y	H	A	L	M	R	P
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		D	P	V	I	F	A	P	V	S	R	E	Y	Y	A	V	G	E	F
Template Known Secondary structure			B					T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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