|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | V | I | V | S | R | L | L | E | Y | P | D | A | A | L | W | Q | H | Q | Q | E | M | F | E | A | I | A | A | S | K | N | L | P | K | E | D | A | H | A | L | G | I | F | L | R | D | L | T | T | M | D | P | L | D | A | Q | A | Q | Y | S | E | L | F | D | R | G | . |
R | A | T | S | L | L | L | F | E | H | V | H |
Query Conservation |   |
  |
|
|
|
|
|   |
|
|   |
|
|
|
|   |
|   |   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|
|   |
|
|
|   |   | . |   |   |   |   |
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|   |
|
|   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
Template Sequence |   |
H | L | K | L | F | S | L | I | F | S | Y | P | D | E | D | K | L | G | K | A | I | A | L | A | E | G | I | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | T | E | I | A | Q | T | L | K | Q | V | D | I | E | A | L | Q | V | E | Y | T | S | L | F | I | S | S | H | P | S | V | P | C | P | P | Y | Q | S | Y | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| S | S | S |
| S | S |
|
| B |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | S | R | D | R | G | Q | A | M | V | D | L | L | A | Q | Y | E | Q | H | G | L | Q | L | N | . |
S | R | E | L | P | D | H | L | P | L | Y | L | E | Y | L | A | Q | L | P | Q | S | E | A | V | E | G | L | K | D | I | A | P | I | L | A | L | L | S | A | R | L | Q | Q | R | E | S | R | Y | A | V | L | F | D | L |
Query Conservation |   |
|
|   |
|   |
|
|   |
|
|
|   |
|   |   |   |
|
|   |
|
|
|   |   |   | . |   |   |
|
|
|
|
|
|
|   |   |
|
|
|
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |
|
|
|
|
|   |   |   |
| . | . | . | . | . |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |   |
|
|   |
|
Template Sequence |   |
E | E | G | S | V | Y | G | K | A | S | L | R | A | A | E | L | Y | S | K | Y | G | L | N | Y | V | Y | E | S | E | P | P | D | H | I | S | V | E | L | E | F | L | S | X | N | P | E | . |
. |
. |
. |
. |
L | L | S | D | F | R | D | W | F | L | E | F | A | K | C | V | E | E | K | S | E | I | Y | A | T | F | A | R | A |
Template Known Secondary structure |   |
 |  | S | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
| S | S | S |
| T | T | B |  |  |  |  |  |  |  |  | T | T |
| G | G | . | . | . | . | . | G |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
  |
  |   |
161 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
L | L | K | L |
Query Conservation |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|   |   |
|
Template Sequence |   |
F | R | K | F |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
147 | . | . | 150 |
  |