Job Description P37663 Confidence 98.71% Date Thu Jan 5 11:56:36 GMT 2012 Rank 8 Aligned Residues 116 % Identity 17% Template d1qjpa_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 1.65

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		V	D	V	T	S	S	M	S	M	G	W	N	F	P	L	Y	E	Q	V	T	T	G	P	V	A	A	L	H	Y	D	G	T	T	T	S	M	Y	N	E	F	G	D	S	T	T	T	L	T	D	P	L	W	H	A	S	V	S	T	L	G	W	R	V	D	S	R	L	.	G	D	L	R	P	W	A	Q	I	S	Y	N
Query Conservation																																																																					.
Alig confidence															.	.								.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation															.	.								.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	L	G	A	G	A	F	G	G	Y	Q	V	.	.	N	P	Y	V	G	F	E	.	.	.	.	M	G	Y	D	W	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	R	M	P	Y	A	Y	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M
Template Known Secondary structure															.	.		T	T					.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.																					S	S	S	S
Template Predicted Secondary structure															.	.								.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.					.	.	.	.	.	.	.														60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	F	G	E	N	I	W	K	A	Q	S	G	L	S	R	M	T	A	T	N	Q	N	G	N	W	L	D	V	T	V	G	A	D	M	L	L	N	Q	N	I	A	A	Y	A	A	L	T	Q	A	E	N	T	T	N	N	S	D	Y	L	Y	T	M	G	V	S	A	R	F
Query Conservation
Alig confidence				.	.	.	.	.	.																																										.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.																																										.	.	.	.	.	.	.
Template Sequence		V	W	.	.	.	.	.	.	R	A	D	T	Y	S	N	V	Y	G	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q	W	.	.	.	.	.	.	.	T	N	G	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure				.	.	.	.	.	.							S	S	S																						T	T										.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.																																										.	.	.	.	.	.	.
Template SS confidence
		101	.							.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.								.	.	.	.	.	.	150	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions