Return to main results Retrieve Phyre Job Id

Job DescriptionP37663
Confidence4.92%DateThu Jan 5 11:56:36 GMT 2012
Rank56Aligned Residues119
% Identity14%Templated1af6a_
SCOP infoTransmembrane beta-barrels Porins Maltoporin-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90.........100.........110.........120.........130.........140.........150. ........160.
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Query Sequence  TPVDVTSSMSMGWNFPLYEQVTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSTLGWRVDSRL. GDLRPWAQIS
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Template Sequence  NNNGHMLRILDHGAISMGDNWDMMY. . VGMYQDINWD. . . . . . . . . . . . . . NDNGTKWWTVGIRPMYKWTPIMSTVMEIG
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   264.....270.........280........ .290........ .300.........310.........320.......
 
   162.......170.........180.........190.........200.. .......210.
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Query Sequence  YNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQ. . . . . . NIAAYAALT. . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  YDNVESQRT. . . . . . . . . . . . . GDKNNQYKITLAQQWQAGDSIWSRPAIRVFATYAKWDEKWGYDYTGNADNNANFGKAV
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   328.330...... ...340.........350.........360.........370.........380.........390....
 
   212.......220.........230
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Query Sequence  . . . . QAENTTNNSDYLYTMGVSA
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Template Sequence  PADFNGGSFGRGDSDEWTFGAQM
Template Known Secondary structure  TTGGG


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   395....400.........410.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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