Job Description P37663 Confidence 2.49% Date Thu Jan 5 11:56:36 GMT 2012 Rank 71 Aligned Residues 152 % Identity 15% Template d1a0tp_ SCOP info Transmembrane beta-barrels Porins Maltoporin-like Resolution 2.40

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	D	I	L	S	Q	R	I	Q	S	S	Q	R	A	L	G	L	E	V	N	L	A	E	E	T	P	V	D	V	T	S	S	M	S	M	G	W	N	F	P	L	Y	E	Q	V	T	T	G	P	V	A	A	L	H	Y	D	G	T	T	T	S	M	Y	N	E	F	G	D	S	T	T	T	L	T	D	P	L	W	H
Query Conservation
Alig confidence																																																				.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	K	T	A	L	L	Y	G	H	G	L	G	A	E	V	K	G	I	G	S	D	G	A	L	R	P	G	A	D	T	W	R	I	A	S	Y	G	T	T	P	L	S	E	N	W	S	V	A	P	.	.	A	M	L	A	Q	R	S	K	D	R	Y	A	D	G	D	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Known Secondary structure													T	T		S		S	B	T	T			T	T			T	T														S	S	S	S						.	.									S	S	S	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.			.	.	.	.	360	.	.	.	.	.	.	.	.	.	370													.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.									.	.	.	.	.	.
Predicted Secondary structure																.																																																				.	.	.	.	.	.	.	.
Query SS confidence																.																																																				.	.	.	.	.	.	.	.
Query Sequence		A	S	V	S	T	L	G	W	R	V	D	S	R	L	.	G	D	L	R	P	W	A	Q	I	S	Y	N	Q	Q	F	G	E	N	I	W	K	A	Q	S	G	L	S	R	M	T	A	T	N	Q	N	G	N	W	L	D	V	T	V	G	A	D	M	L	L	N	Q	.	.	.	.	.	.	.	.	N	I	A	A	Y	A
Query Conservation																.																																																				.	.	.	.	.	.	.	.
Alig confidence																.														.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.
Template Sequence		Y	Q	W	A	T	F	N	L	R	L	I	Q	A	I	N	Q	N	F	A	L	A	Y	E	G	S	Y	Q	Y	.	.	.	.	.	.	.	M	D	L	K	P	E	G	Y	N	D	R	Q	A	V	N	G	S	F	Y	K	L	T	F	A	P	T	F	K	V	G	S	I	G	D	F	F	S	R	P	E	I	R	F	Y	T
Template Known Secondary structure															S	S	S	S												.	.	.	.	.	.	.						T	T	G	G	G																			S	S		T	T		T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.								400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
		209	210														.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Q	A	E	N	T	T	N	N	S	D	Y	L	Y	T	M	G	V	S	A
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	W	M	D	W	S	K	K	L	N	N	Y	A	S	D	D	A	L	G	S	D	G	F	N	S	G	G	E	W	S	F	G	V	Q	M
Template Known Secondary structure								G	G	G	G	G	S		S	S	S	S	T	T	B	T	T	B		S	S
Template Predicted Secondary structure
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions