Return to main results Retrieve Phyre Job Id

Job DescriptionP37663
Confidence2.49%DateThu Jan 5 11:56:36 GMT 2012
Rank71Aligned Residues152
% Identity15%Templated1a0tp_
SCOP infoTransmembrane beta-barrels Porins Maltoporin-like
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80.........90.........100.........110.........120.........130.......
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Query Sequence  YNDILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQVTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWH
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Template Sequence  SSKTALLYGHGLGAEVKGIGSDGALRPGADTWRIASYGTTPLSENWSVAP. . AMLAQRSKDRYADGD. . . . . . . . . . . . S
Template Known Secondary structure  TT
S
SBTT

TT

TT
SSSS..SSSSTT
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   306...310.........320.........330.........340.........350..... ....360.........370 .
 
   138.140.........150. ........160.........170.........180.........190.........200.. ......
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Query Sequence  ASVSTLGWRVDSRL. GDLRPWAQISYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQ. . . . . . . . NIAAYA
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Template Sequence  YQWATFNLRLIQAINQNFALAYEGSYQY. . . . . . . MDLKPEGYNDRQAVNGSFYKLTFAPTFKVGSIGDFFSRPEIRFYT
Template Known Secondary structure  SSSS.......
TTGGG


SS
TT
TT


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   372.......380.........390......... 400.........410.........420.........430.........440....
 
   209210 .........220.........230
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Query Sequence  AL. . . . . . . . . . . . . TQAENTTNNSDYLYTMGVSA
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Template Sequence  SWMDWSKKLNNYASDDALGSDGFNSGGEWSFGVQM
Template Known Secondary structure 
GGGGGS
SSSSTTBTTB
SS
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   445....450.........460.........470.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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