Job Description P37663 Confidence 1.59% Date Thu Jan 5 11:56:36 GMT 2012 Rank 100 Aligned Residues 158 % Identity 9% Template c3fhhA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane heme receptor shua; PDBTitle: crystal structure of the heme/hemoglobin outer membrane2 transporter shua from shigella dysenteriae Resolution 2.60 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	D	S	D	H	Q	P	D	Y	N	D	I	L	S	Q	R	I	Q	S	S	Q	R	A	L	G	L	E	V	N	L	A	E	E	T	P	V	D	V	T	S	S	M	S	M	G	W	N	F	P	L	Y	E	Q	V	T	T	G	P	V	A	A	L	H	Y	D	G	T	T	T	S	M	Y	N	E	F	G	D	S	T
Query Conservation
Alig confidence																																																				.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		A	L	E	F	K	A	S	Y	F	D	T	K	A	K	D	Y	I	S	T	T	V	D	F	A	A	A	T	T	M	S	Y	N	V	P	N	A	K	I	W	G	W	D	V	M	T	K	Y	T	T	D	.	.	.	.	.	L	F	S	L	D	V	A	Y	N	R	T	R	G	K	D	T	D	T	G	E	Y	I	S	S	I
Template Known Secondary structure																								G	G	G	T																								S	.	.	.	.	.	S															T	T	T			B		S	S
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.						520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		T	T	L	T	D	P	L	W	H	A	S	V	S	T	L	G	W	R	V	D	S	R	L	G	D	L	R	P	W	A	Q	I	S	Y	N	Q	Q	F	G	E	N	I	W	K	A	Q	S	G	L	S	R	M	T	A	T	N	Q	N	G	N	W	L	D	V	T	V	G	A	D	M	L	L	N	.	.	.	Q	N	I	A
Query Conservation																																																																											.	.	.
Alig confidence				.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation				.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	.	.	.	.	.	.	.	.	D	T	V	T	S	T	L	N	I	P	I	A	H	S	G	F	S	V	G	W	V	G	T	F	A	D	R	S	T	H	I	S	S	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	Y	G	V	N	D	F	Y	V	S	Y	Q	G	Q	Q	A	L	K	G	M	T
Template Known Secondary structure				.	.	.	.	.	.	.	.												T	T	S	S																					.	.	.	.	.	.	.	.	.	.	.	.	.																G	G	G	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		545	.									.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.														.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.								.	.	.	.	.	.	230	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.
Query Sequence		A	Y	A	A	L	T	Q	A	E	N	T	T	N	N	S	D	Y	L	.	.	.	.	.	.	.	Y	T	M	G	V	S	A	R	F
Query Conservation																				.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	T	L	V	L	G	N	A	F	D	K	E	Y	W	S	P	Q	G	I	P	Q	D	G	R	N	G	K	I	F	V	S	Y	Q	W
Template Known Secondary structure								S	T	T					B		T	T	S		B				S
Template Predicted Secondary structure
Template SS confidence
		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions