Job Description P37663 Confidence 88.97% Date Thu Jan 5 11:56:36 GMT 2012 Rank 34 Aligned Residues 130 % Identity 16% Template c3dzmB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:hypothetical conserved protein; PDBTitle: crystal structure of a major outer membrane protein from thermus2 thermophilus hb27 Resolution 2.80 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		V	D	V	T	S	S	M	S	M	G	W	N	F	P	L	Y	E	Q	V	T	T	G	P	V	A	A	L	H	Y	D	G	T	T	T	S	M	Y	N	E	F	G	D	S	T	T	T	L	T	D	P	L	W	H	A	S	V	S	T	L	G	W	R	V	D	S	R	L	.	G	D	L	R	P	W	A	Q	I	S	Y	N
Query Conservation																																																																					.
Alig confidence														.				.	.																																																		.
Template Conservation														.				.	.
Template Sequence		Q	N	V	T	L	S	L	D	V	L	Y	K	.	P	L	P	.	.	V	E	V	A	P	Y	F	G	V	R	Y	N	F	F	S	G	G	Y	T	D	P	E	D	N	L	T	I	K	A	Q	T	I	S	S	N	Q	L	G	L	G	L	G	V	R	A	A	Y	P	L	M	P	N	L	S	L	V	G	D	L	G	V	D
Template Known Secondary structure														.				.	.	S																					S	S	S	S	S	S																								T	T
Template Predicted Secondary structure														.				.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.		.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	F	G	E	N	I	W	K	A	Q	S	G	L	S	R	M	T	A	T	N	Q	N	G	N	W	L	D	V	T	V	G	A	D	M	L	L	N	Q	N	I	A	A	Y	A	A	L	T	Q	A	E	N	T	T	N	N	S	D	Y	L	Y	T	M	G	V	S	A	R	F
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		Y	Y	F	Q	A	C	F	T	R	V	E	E	D	D	S	G	N	K	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	V	C	P	G	D	S	G	Y	E	D	V	N	K	F	V	T	Q	P	.	E	W	V	L	K	L	R	L	G	A	A	Y	R	F
Template Known Secondary structure															T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S	T	T								B				.	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.															.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions