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Job DescriptionP37663
Confidence7.62%DateThu Jan 5 11:56:36 GMT 2012
Rank50Aligned Residues136
% Identity10%Templatec2k4tA_
PDB info PDB header:membrane protein,apoptosisChain: A: PDB Molecule:voltage-dependent anion-selective channel PDBTitle: solution structure of human vdac-1 in ldao micelles
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  VDVTSSMSMGWNFPLYEQVTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQISYNQ
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Template Sequence  EGWLAGYQMNFETAKSRVTQSNFAVGYKTDEFQLHTNVND. GTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIAAKY
Template Known Secondary structure  TTTTTTS



SST.TT

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   147..150.........160.........170.........180...... ...190.........200.........210.........220.....
 
   165....170.........180.........190.........200.........210.........220.........230.
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Query Sequence  QFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTNNSDYLYTMGVSAR
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Template Sequence  QI. DPDACFSAKVN. . . . . . . . . NSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEFQ
Template Known Secondary structure  .TT.........SSS

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   226. ..230........ .240.........250.........260.........270.........280..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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