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Job DescriptionP37663
Confidence97.96%DateThu Jan 5 11:56:36 GMT 2012
Rank17Aligned Residues124
% Identity12%Templatec2iwvD_
PDB info PDB header:ion channelChain: D: PDB Molecule:outer membrane protein g; PDBTitle: structure of the monomeric outer membrane porin ompg in the2 open and closed conformation
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  MSMGWNFPLYEQVTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQISYNQQFGENI
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Template Sequence  TETGLQYTFNETV. . . . . . ALRVNYYLERGFNMDDSRN. . . . NGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSNWDW
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   153......160..... ....170.........180.... .....190.........200.........210.........220..
 
   171........180.........190.........200.........210.........220. ........230..
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Query Sequence  WKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTNNSD. . . . YLYTMGVSARF
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Template Sequence  QDD. . . . . . . . IEREGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYSF
Template Known Secondary structure  TT
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   223.. ....230.........240.........250.........260.........270.........280
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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