Job Description P37663 Confidence 81.79% Date Thu Jan 5 11:56:36 GMT 2012 Rank 36 Aligned Residues 165 % Identity 8% Template c1xkhC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:ferripyoverdine receptor; PDBTitle: pyoverdine outer membrane receptor fpva from pseudomonas aeruginosa2 pao1 bound to pyoverdine Resolution 3.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	N	D	I	L	S	Q	R	I	Q	S	S	Q	R	A	L	G	L	E	V	N	L	A	E	E	T	P	V	D	V	T	S	S	M	S	M	G	W	N	F	P	L	Y	E	Q	V	T	T	G	P	V	A	A	L	H	Y	D	G	T	T	T	S	M	Y	N	E	F	G	D	S	T	T	T	L	T	D	P	L	W
Query Conservation
Alig confidence																																																			.	.													.	.	.	.	.	.
Template Conservation																																																			.	.													.	.	.	.	.	.
Template Sequence		H	E	E	N	R	A	E	E	D	A	L	Y	N	S	K	P	T	N	P	A	I	T	Y	A	Y	K	G	I	K	A	K	T	K	G	Y	E	A	E	I	S	G	E	L	A	P	G	W	Q	V	.	.	Q	A	G	Y	T	H	K	I	I	R	D	D	.	.	.	.	.	.	S	G	K	K	V	S	T	W	E	P	Q
Template Known Secondary structure											S	S	T	T	S					T	T		S																					S	S	S	S				.	.												T	.	.	.	.	.	.	T			B			T	T	S		S
Template Predicted Secondary structure																																																			.	.													.	.	.	.	.	.
Template SS confidence
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.			.	.	690	.	.	.	.	.	.	.	.	.							700	.	.	.	.	.	.	.	.	.	710
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	S	V	S	T	L	G	W	R	V	D	S	R	L	G	D	L	R	P	W	A	Q	I	S	Y	N	Q	Q	F	G	E	N	I	W	K	A	Q	S	G	L	S	R	M	T	A	T	N	Q	N	G	N	W	L	D	V	T	V	G	A	D	M	L	L	N	Q	N	I	A	A	Y	A	A	L	T	Q	A	E	N	T
Query Conservation
Alig confidence																																																		.	.	.
Template Conservation																																																		.	.	.
Template Sequence		D	Q	L	S	L	Y	T	S	Y	K	F	K	G	A	L	D	K	L	T	V	G	G	G	A	R	W	Q	G	K	S	W	Q	X	V	Y	N	N	P	R	S	R	W	E	K	F	S	Q	E	.	.	.	D	Y	W	L	V	D	L	X	A	R	Y	Q	I	T	D	K	L	S	A	S	V	N	V	N	N	V	F	D	K
Template Known Secondary structure														G	G	G	T	T																				G	G	G										.	.	.														S	S	S								T	T	T	T
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		711	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.				.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.
		217	.	.	220	.	.													.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	N	N	S	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	T	M	G	V	S	A	R	F
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	Y	Y	T	N	I	G	F	Y	T	S	A	S	Y	G	D	P	R	N	L	X	F	S	T	R	W	D	F
Template Known Secondary structure							S		S	S	S								S								S
Template Predicted Secondary structure
Template SS confidence
		788	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions