 |
Job Description | P37663 | Confidence | 4.59% | Date | Thu Jan 5 11:56:36 GMT 2012 |
Rank | 58 | Aligned Residues | 70 |
% Identity | 13% | Template | c1qd6C_ |
PDB info |
PDB header:membrane protein | Chain: C: PDB Molecule:protein (outer membrane phospholipase (ompla)); |
PDBTitle: outer membrane phospholipase a from escherichia coli
|
Resolution | 2.10 Å |
|
 |
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | |
|
. | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | A | Q | I | S | Y | N | Q | Q | F | G | E | N | I | W | K | A | Q | S | G | L | S | R | M | T | A | T | N | Q | N | G | N | W | L | D | V | T | V | G | A | D | M | L | L | N | Q | N | I | A | A | Y | A | A | L | T | Q | A | E | N | . |
. |
T | T | N | N | S | D | Y | L | Y | T | M | G | V | S | A | R | F |
Query Conservation |   |
|   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |
|
|   |
|   |   |   |   |   |   |
| . | . |   |   |   |   |
|
|   |   |   |
|   |
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |
|
|   |
|   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|   |   |   |
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|
|
|
|
|
|   |
|
Template Sequence |   |
Y | Y | Q | L | K | I | G | Y | H | L | G | D | A | V | L | S | A | K | . |
. |
. |
. |
. |
. |
G | Q | Y | N | W | N | T | G | Y | G | G | A | E | L | G | L | S | Y | P | I | T | K | H | V | R | L | Y | T | Q | V | Y | S | G | Y | G | E | S | L | I | D | Y | N | F | N | Q | T | R | V | G | V | G | V | M | L |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |
| T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |
| S | S | G | G | G | T | T |
|  |  |  |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
194 | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|