 |
Job Description | P17411 | Confidence | 90.82% | Date | Thu Jan 5 11:36:08 GMT 2012 |
Rank | 432 | Aligned Residues | 73 |
% Identity | 11% | Template | d2gz1a1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 1.80 |
|
 |
  |   |
4 | . | . | . | . | . | 10 | . | . | |
. | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | K | V | V | T | I | G | G | . |
G | S | S | Y | T | P | E | L | L | E | G | F | I | K | R | Y | H | E | L | P | V | S | E | L | W | L | V | D | V | E | G | G | K | P | K | L | D | I | I | F | D | L | C | Q | R | M | I | D | N | A | G | V | P | M | K | L | Y | K | T | L | D | R | R | E | A | L | K | D | A | D |
Query Conservation |   |
  |   |
|
|   |
|
|
|
| . |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|
|
|
|   |
|
|   |   | . | . | . |
|
|
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   | . | . |   |   |   |   |   |
|
|
Template Sequence |   |
G | Y | T | V | A | V | V | G | A | T | G | A | V | G | A | Q | . |
. |
. |
M | I | K | M | L | E | E | S | T | L | P | I | D | K | I | R | Y | L | A | S | A | R | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | G | K | S | L | K | F | K | D | Q | D | I | T | I | E | E | T | T | E | . |
. |
T | A | F | E | G | V | D |
Template Known Secondary structure |   |
|  |  |  |  |  |  | T | T | T | S |  |  |  |  |  | . | . | . |  |  |  |  |  |  | T |
|
| S |
|  |  |  |  |  |  |  |  |
| G | G | G | . | . | . | . | . | . | . | . | . | . | T | T |
|  |  |  |  | T | T |  |  |  |  |  |  |  |
|
| T | . | . | T | T | T | T | T |
| S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|  | . | . |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | |
|
|
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
60 | . | . | . | . | . | . |
  |
  |   |
83 | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | V | T | T | Q | L | R | V | G |
Query Conservation |   |
|
|
|   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |   |   |   |
Template Sequence |   |
I | A | L | F | S | A | G | S | S |
Template Known Secondary structure |   |
 |  |  |  |
| S |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
67 | . | . | 70 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|