 |
Job Description | P17411 | Confidence | 97.04% | Date | Thu Jan 5 11:36:08 GMT 2012 |
Rank | 190 | Aligned Residues | 85 |
% Identity | 26% | Template | d1vi2a1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Aminoacid dehydrogenase-like, C-terminal domain
|
Resolution | 2.10 |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
. | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
Q | K | L | K | V | V | T | I | G | G | G | S | S | Y | T | P | E | L | L | E | G | F | I | K | R | Y | H | E | L | P | V | S | E | L | W | L | V | D | V | E | G | G | K | P | K | L | D | I | I | F | D | L | C | Q | R | M | I | D | N | A | G | V | P | M | K | L | Y | K | T | L | D | . |
. |
. |
R | R | E | A | L | K |
Query Conservation |   |
|   |   |
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
| . | . | . |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   | . | . | . | . | . |   |
|   |
|   |
|
|
|   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | G | K | T | X | V | L | L | G | A | G | G | A | S | T | A | I | G | A | Q | G | A | I | E | G | L | K | . |
. |
. |
. |
. |
E | I | K | L | F | N | R | R | D | E | . |
. |
F | F | D | K | A | L | A | F | A | Q | R | V | N | E | N | T | D | C | V | V | T | V | T | D | L | A | D | Q | Q | A | F | A | E | A | L | A |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | . | . | . | . | . |  |  |  |  |  |  |
| S | S | T | . | . | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . |  |  |  |  |  |  |
|
|  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
123 | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
150 | . | . | . | . | . | . | . | . | . | |
|
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | D | F | V | T | T | Q | L | R | V | G | Q | L | P |
Query Conservation |   |
  |
|
|
|
|
|   |
|   |   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|
|
|
|
|   |   |   |
Template Sequence |   |
S | A | D | I | L | T | N | G | T | K | V | G | X | K | P |
Template Known Secondary structure |   |
T |
| S |  |  |  |  |
| S | S | T | T | S | T | T |
Template Predicted Secondary structure |   |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
196 | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|