Job Description P17411 Confidence 100.00% Date Thu Jan 5 11:36:08 GMT 2012 Rank 10 Aligned Residues 261 % Identity 21% Template d1obba2 SCOP info LDH C-terminal domain-like LDH C-terminal domain-like AglA-like glucosidase Resolution 1.90

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		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		N	I	P	I	G	M	K	M	F	I	R	D	V	L	M	L	K	D	S	D	D	L	S	I	D	L	F	G	L	N	H	M	V	F	I	K	D	V	L	I	N	G	K	S	R	F	A	E	L	L	D	G	V	A	S	G	Q	L	K	A	S	S	V	K	N	I	F	D	.	.	L	P	F	S	E	G	L	I	R	S
Query Conservation																																																																						.	.
Alig confidence				.														.																																																				.	.
Template Conservation				.														.
Template Sequence		H	G	.	H	Y	G	V	M	E	I	V	E	K	L	G	L	.	E	E	E	K	V	D	W	Q	V	A	G	V	N	H	G	I	W	L	N	R	F	R	Y	N	G	G	N	A	Y	P	L	L	D	K	W	I	E	E	K	S	K	D	W	K	P	E	N	P	F	N	D	Q	L	S	P	A	A	I	D	M	Y	R	F
Template Known Secondary structure			G	.	G	G									T	T		.		G	G	G									T	T										T	T														T	G	G	G				S	S	T	T			T	T	S
Template Predicted Secondary structure				.														.
Template SS confidence
		175	.		.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		251	.	.	.	.	.						.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.								280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure								.	.	.	.	.																								.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.																								.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Query Sequence		L	N	L	L	P	C	.	.	.	.	.	S	Y	L	L	Y	Y	F	K	Q	K	E	M	L	A	I	E	M	G	E	Y	Y	K	G	.	.	.	.	.	.	.	G	A	R	A	Q	V	V	Q	K	V	E	K	Q	L	F	E	L	Y	K	N	P	E	L	K	V	K	P	K	E	L	E	Q	.	.	.	.	.	.	.
Query Conservation								.	.	.	.	.																								.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.																								.	.	.	.	.	.	.																																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	G	V	M	P	I	G	D	T	V	R	N	S	S	W	R	Y	H	R	D	L	E	T	K	K	K	W	Y	G	E	P	W	G	G	A	D	S	E	I	G	W	K	W	Y	Q	D	T	L	G	K	V	T	E	I	T	K	K	V	A	K	F	I	K	E	N	P	S	V	R	L	S	D	L	G	S	V	L	G	K	D
Template Known Secondary structure			S	S				G	G	G	T	T	S			G	G	G	G	S	S										T	T	T	T	S	T	T	S																													T	T			G	G	G		S	S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
																312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	G	A	Y	Y	S	D	A	A	C	E	V	I	N	A	I	Y	N	D	K	Q	A	E	H	Y	V	N	I	P	H	H	G	Q	I	D	N	I	P	A	D	W	A	V	E	M	T	C	K	L	G	R	D	G	A	T	P	H	P	R	I	.	T	H	F	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.		.
Template Conservation																																																																											.
Template Sequence		L	S	E	K	Q	F	V	L	E	V	E	K	I	L	D	P	E	R	K	S	G	E	Q	H	I	P	F	I	D	A	L	L	N	D	N	K	A	R	F	V	V	N	I	P	N	K	G	I	I	H	G	I	D	D	D	V	V	V	E	V	P	A	L	V	D	K	N	G	I	H	P	E	K	.	I	E	P	P	L	P
Template Known Secondary structure																	T	T				S		S																							T	T	S	S	T	T	S		T	T	S										T	T							.		S	S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.		.	.	.	.	410	.
		377	.	.	380		.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.							430	.	.	.	.	.	.
Predicted Secondary structure						.																																																		.	.	.	.	.	.
Query SS confidence						.																																																		.	.	.	.	.	.
Query Sequence		D	K	V	M	.	G	L	I	H	T	I	K	G	F	E	I	A	A	S	N	A	A	L	S	G	E	F	N	D	V	L	L	A	L	N	L	S	P	L	V	H	S	D	R	D	A	E	L	L	A	R	E	M	I	.	.	.	.	.	.	L	A	H	E	K	W	L
Query Conservation						.																																																		.	.	.	.	.	.
Alig confidence						.																																																		.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	V	V	K	Y	Y	L	R	P	R	I	M	R	M	E	M	A	L	E	A	F	L	T	G	D	I	R	I	I	K	E	L	L	Y	R	D	P	R	T	K	S	D	E	Q	V	E	K	V	I	E	E	I	L	A	L	P	E	N	E	E	M	R	K	H	Y	L
Template Known Secondary structure								T																													T	S	T	T																T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions