Return to main results Retrieve Phyre Job Id

Job DescriptionP17411
Confidence96.35%DateThu Jan 5 11:36:08 GMT 2012
Rank245Aligned Residues103
% Identity13%Templated1gpja2
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Aminoacid dehydrogenase-like, C-terminal domain
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  QKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKPKLDIIFDLCQRMIDNAGVPMKLYKTLDRREALKDAD
Query Conservation 
  

 





          
     
   

 
 


     
  
                
  


   

  

Alig confidence 


























.....







..










.........

















Template Conservation    
 






  
      
      ..... 
 
  
 ..   
  
    .........         
      

Template Sequence  HDKTVLVVGAGEMGKTVAKSLVDRGVR. . . . . AVLVANRT. . YERAVELARDL. . . . . . . . . GGEAVRFDELVDHLARSD
Template Known Secondary structure  TT
S



S.....
SS...........T


GGGT
S
Template Predicted Secondary structure 








.....




..
.........







Template SS confidence 















































































   166...170.........180.........190.. .......200 .........210. ........220.........
 
   83......90.........100.........110.........120.........130.........140 .........150....
Predicted Secondary structure 





















...



Query SS confidence 

























































. . .













Query Sequence  FVTTQLRVGQLPARELDERIPLSHGYLGQETNGAGGLFKGLRTIPVIFDIVKDVEELC. . . PNAWVINFTNPAGM
Query Conservation 


 
  


   
  

 

 
 
   


 
 

   







  

  
    ...






 


  
Alig confidence 








.................................















...













Template Conservation 


 

 
 .................................  

    
               



 



Template Sequence  VVVSATAAP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HPVIHVDDVREALRKRDRRSPILIIDIANPRDV
Template Known Secondary structure 

SSS.................................S

B

SS




SS
SB
Template Predicted Secondary structure 




.................................


















Template SS confidence 










































































   230........ .240.........250.........260.........270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions