Job Description P17411 Confidence 97.19% Date Thu Jan 5 11:36:08 GMT 2012 Rank 179 Aligned Residues 144 % Identity 11% Template c3uuwB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase with nad(p)-binding rossmann-fold PDBTitle: 1.63 angstrom resolution crystal structure of dehydrogenase (mvim)2 from clostridium difficile. Resolution 1.63 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		Q	K	L	K	V	V	T	I	G	G	G	S	S	Y	T	P	E	L	L	E	G	F	I	K	R	Y	H	E	L	P	V	S	E	L	.	W	L	V	D	V	E	G	G	K	P	K	L	D	I	I	F	D	L	C	Q	R	M	I	D	N	A	G	V	P	M	K	L	Y	K	T	L	D	R	R	E	A	L	K	D	A
Query Conservation																																				.
Alig confidence																								.	.	.	.									.										.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																								.	.	.	.																			.	.	.	.	.	.	.	.	.													.	.	.	.
Template Sequence		K	N	I	K	M	G	M	I	G	L	G	S	I	A	Q	K	A	Y	L	P	I	L	.	.	.	.	T	K	S	E	R	F	E	F	V	G	A	F	T	P	N	K	V	K	.	.	.	.	.	.	.	.	.	R	E	K	I	C	S	D	Y	R	I	M	P	.	.	.	.	F	D	S	I	E	S	L	A	K	K	C
Template Known Secondary structure												S							T					.	.	.	.	T	S		S	S	S								S					.	.	.	.	.	.	.	.	.									T			B	.	.	.	.		S	S						T	T
Template Predicted Secondary structure																								.	.	.	.																			.	.	.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.										.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	V	T	T	Q	L	R	V	G	Q	L	P	A	R	E	L	D	E	R	I	P	L	S	H	G	Y	L	G	Q	E	T	N	G	A	G	G	L	F	K	G	L	R	T	I	P	V	I	F	D	I	V	K	D	V	E	E	L	C	P	N	A	W	V	I	N	F	T	N	P	A	G	M	V	T	E	A	V	Y	R
Query Conservation
Alig confidence																											.										.	.	.	.	.	.	.	.																	.
Template Conservation																											.										.	.	.	.	.	.	.	.																	.
Template Sequence		D	C	I	F	L	H	S	S	T	E	T	H	Y	E	I	I	K	I	L	L	N	L	G	V	H	.	V	Y	V	D	K	P	L	A	S	.	.	.	.	.	.	.	.	T	V	S	Q	G	E	E	L	I	E	L	S	T	K	K	N	.	L	N	L	M	V	G	F	N	R	R	F	C	P	M	Y	K	E	I	K	N
Template Known Secondary structure		S																					T	T			.					S	S	S	S	S	.	.	.	.	.	.	.	.	S															T	.								G	G	G	G
Template Predicted Secondary structure																											.										.	.	.	.	.	.	.	.																	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.									.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	G	F	K	R	F	I	G	V	C	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	T	E	I	V	S	I	N	I	C	K
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions