Return to main results Retrieve Phyre Job Id

Job DescriptionP17411
Confidence96.80%DateThu Jan 5 11:36:08 GMT 2012
Rank205Aligned Residues71
% Identity15%Templatec3m2tA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:probable dehydrogenase; PDBTitle: the crystal structure of dehydrogenase from chromobacterium2 violaceum
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30....... ..40.........50.........60.........70.........80
Predicted Secondary structure 















.












Query SS confidence 



































.










































Query Sequence  SQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELW. LVDVEGGKPKLDIIFDLCQRMIDNAGVPMKLYKTLDRREALKD
Query Conservation   
  

 





          
     
   

 .
 


     
  
                
  


   

  
Alig confidence 



























....



.







.........










...











Template Conservation 
  






 
          
     ....  



 
     .........           ...        

  
Template Sequence  LSLIKVGLVGIGAQXQENLLPSLLQXQD. . . . IRIVAACDSDLER. . . . . . . . . ARRVHRFISDI. . . PVLDNVPAXLNQ
Template Known Secondary structure 




STT
TT....
SS.........GGGGGTS
S
...
SS
Template Predicted Secondary structure 









....



.........



...



Template SS confidence 















































































   1........10.........20........ .30.........40. ........50.. .......60....
 
   81 .......
Predicted Secondary structure 
..


Query SS confidence 
. .






Query Sequence  A. . DFVTTQL
Query Conservation 
..



 
 
Alig confidence 
..






Template Conservation    

 
 
 
Template Sequence  VPLDAVVXAG
Template Known Secondary structure  S

S
S
Template Predicted Secondary structure 





Template SS confidence 









   65....70....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions