Job Description P17411 Confidence 96.21% Date Thu Jan 5 11:36:08 GMT 2012 Rank 257 Aligned Residues 117 % Identity 13% Template c3kboB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glyoxylate/hydroxypyruvate reductase a; PDBTitle: 2.14 angstrom crystal structure of putative oxidoreductase (ycdw) from2 salmonella typhimurium in complex with nadp Resolution 2.14 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	Q	K	L	K	V	V	T	I	G	G	G	S	S	Y	T	P	E	L	L	E	G	F	I	K	R	Y	H	E	L	P	V	S	E	L	W	L	V	D	V	E	G	G	K	P	K	L	D	I	I	F	D	L	C	Q	R	M	I	D	N	A	G	V	P	M	K	L	Y	K	T	L	D	R	R	E	A	L	K	D
Query Conservation
Alig confidence																														.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	R	E	E	F	S	V	G	I	X	G	A	G	V	L	G	A	K	V	A	E	S	L	Q	A	W	G	F	.	.	.	.	.	.	P	L	R	C	W	S	R	S	R	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	P	G	V	E	S	Y	V	G	R	E	E	L	R	A	F	L	N	Q
Template Known Secondary structure			S	T	T									S												T	T	T		.	.	.	.	.	.							S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T						S	T	T	T							T
Template Predicted Secondary structure																														.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.																	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	F	V	T	T	Q	L	R	V	G	Q	L	P	A	R	E	L	D	E	R	I	P	L	S	H	G	Y	L	G	Q	E	T	N	G	A	G	G	L	F	K	G	L	R	T	I	P	V	I	F	D	I	V	K	D	V	E	E	L	C	P	N	A	W	V	I	N	F	T	N	P	A	G	M	V	T	E	A	V	Y
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	R	V	L	I	N	L	L	P	.	.	.	.	.	.	.	.	.	.	.	N	T	A	Q	T	V	G	I	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	L	L	D	Q	L	P	D	G	A	Y	V	L	N	L	A	R	G	V	H	V	Q	E	A	D	L	L
Template Known Secondary structure			S								.	.	.	.	.	.	.	.	.	.	.			T	T	T	T	T		B	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	S		T	T							S		G	G	G	B
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.												200	.	.	.	.	.	.	.	.	.																							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	T	G	F	K	R	F	I	G	V	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	L	D	S	G	K	L	K	G	A	X
Template Known Secondary structure							T	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions