Return to main results Retrieve Phyre Job Id

Job DescriptionP17411
Confidence96.77%DateThu Jan 5 11:36:08 GMT 2012
Rank211Aligned Residues93
% Identity17%Templatec3gvpB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:adenosylhomocysteinase 3; PDBTitle: human sahh-like domain of human adenosylhomocysteinase 3
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKPKLDIIFDLCQRMIDNAGVPMKLYKTLDRREALKD
Query Conservation 
 
  

 





          
     
   

 
 


     
  
                
  


   

  
Alig confidence 



























......

















...............












Template Conservation   
 



 


 
 

  

  
 
 
 ...... 
 
 
  
     
   ...............
     
 
 
  
Template Sequence  MFGGKQVVVCGYGEVGKGCCAALKAMGS. . . . . . IVYVTEIDPICALQACMD. . . . . . . . . . . . . . . GFRLVKLNEVIRQ
Template Known Secondary structure 

TT


STT
......
SST...............T


TTT
Template Predicted Secondary structure 










......




...............





Template SS confidence 















































































   389390.........400.........410...... ...420.........430.... .....440.......
 
   81........90.........100.........110.........120.........130.........140.........150.
Predicted Secondary structure 



























Query SS confidence 






































































Query Sequence  ADFVTTQLRVGQLPARELDERIPLSHGYLGQETNGAGGLFKGLRTIPVIFDIVKDVEELCPNAWVINFTNP
Query Conservation 




 
  


   
  

 

 
 
   


 
 

   







  

  
    






 


Alig confidence 














.....................................


















Template Conservation 




  


  

 .....................................   
  

 







  
Template Sequence  VDIVITCTGNKNVVT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . REHLDRMKNSCIVCNMGHS
Template Known Secondary structure 
S
SS
SSSB
.....................................S
TT
SST
Template Predicted Secondary structure 










.....................................







Template SS confidence 






































































   448.450.........460.. .......470.........480.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions