Return to main results Retrieve Phyre Job Id

Job DescriptionP17411
Confidence96.43%DateThu Jan 5 11:36:08 GMT 2012
Rank232Aligned Residues65
% Identity17%Templatec3dapB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:diaminopimelic acid dehydrogenase; PDBTitle: c. glutamicum dap dehydrogenase in complex with nadp+ and2 the inhibitor 5s-isoxazoline
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  SQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKPKLDIIFDLCQRMIDNAGVPMKLYKTLDRREALKDA
Query Conservation   
  

 





          
     
   

 
 


     
  
                
  


   

  
Alig confidence 














..














..










.................

















Template Conservation 
  


 
 
 
 

..      
      

..


        .................   

    
        
Template Sequence  MTNIRVAIVGYGNLG. . RSVEKLIAKQPDMDL. . VGIFSRRATLD. . . . . . . . . . . . . . . . . TKTPVFDVADVDKHADDV
Template Known Secondary structure 




S..TT
SS..S
S

S.................SSS
GGGGGGGTTT
Template Predicted Secondary structure 





..



..


.................












Template SS confidence 















































































   1........10..... ....20.........30 .........40. ........50.........
 
   82.....
Predicted Secondary structure 

Query SS confidence 





Query Sequence  DFVTTQ
Query Conservation 



 
Alig confidence 





Template Conservation 
 
 
 
Template Sequence  DVLFLC
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 





   60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions