Return to main results Retrieve Phyre Job Id

Job DescriptionP17411
Confidence97.16%DateThu Jan 5 11:36:08 GMT 2012
Rank184Aligned Residues106
% Identity14%Templatec2rirA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:dipicolinate synthase, a chain; PDBTitle: crystal structure of dipicolinate synthase, a chain, from bacillus2 subtilis
Resolution2.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKPKLDIIFDLCQRMIDNAGVPMKLYKTLDRREALKD
Query Conservation 
 
  

 





          
     
   

 
 


     
  
                
  


   

  
Alig confidence 



























......







..








..........
















Template Conservation   
 

 
 


 
  
   
  
   
 ...... 
      ..         .......... 
        
 
    
Template Sequence  TIHGSQVAVLGLGRTGXTIARTFAALGA. . . . . . NVKVGARS. . SAHLARITE. . . . . . . . . . XGLVPFHTDELKEHVKD
Template Known Secondary structure 
STTS

STT
......SS............TT
GGGSTT
Template Predicted Secondary structure 










......

..


..........







Template SS confidence 















































































   151........160.........170........ .180...... ...190..... ....200.........210..
 
   81........90.........100.........110.........120.........130.........140........ .150.........
Predicted Secondary structure 

























.

Query SS confidence 



































































.










Query Sequence  ADFVTTQLRVGQLPARELDERIPLSHGYLGQETNGAGGLFKGLRTIPVIFDIVKDVEELCPNAWVINF. TNPAGMVTEAV
Query Conservation 




 
  


   
  

 

 
 
   


 
 

   







  

  
    






 .


  


 
 
Alig confidence 













......................................















.










Template Conservation 




   
   
 ......................................   
      




 
   
 

    
Template Sequence  IDICINTIPSXILN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QTVLSSXTPKTLILDLASRPGGTDFKYA
Template Known Secondary structure 
S

SS

B
......................................TTS
TT

SSTT
SB
Template Predicted Secondary structure 







......................................













Template SS confidence 















































































   213......220...... ...230.........240.........250....
 
   160..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  YRH
Query Conservation   
 
Alig confidence 


Template Conservation     
Template Sequence  EKQ
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   255..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions