Job Description P17411 Confidence 87.03% Date Thu Jan 5 11:36:08 GMT 2012 Rank 473 Aligned Residues 110 % Identity 10% Template c2nvuB_ PDB info PDB header:protein turnover, ligase Chain: B: PDB Molecule:maltose binding protein/nedd8-activating enzyme PDBTitle: structure of appbp1-uba3~nedd8-nedd8-mgatp-ubc12(c111a), a2 trapped ubiquitin-like protein activation complex Resolution 2.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.														.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	K	L	K	V	V	T	I	G	G	G	S	S	Y	T	P	E	L	L	E	G	F	I	K	R	Y	H	E	L	P	V	S	E	L	W	L	V	D	V	E	G	G	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	D	I	I	F	D	L	C	Q	R	M	I	D	N	A	G	V	P	M	K	L	Y
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.
Template Sequence		D	T	C	K	V	L	V	I	G	A	G	G	L	G	C	E	L	L	K	N	L	A	L	S	G	F	R	.	.	.	.	.	Q	I	H	V	I	D	M	D	T	I	D	V	S	N	L	N	R	Q	F	L	F	R	P	K	D	I	G	R	P	K	A	E	V	A	A	E	F	L	N	D	R	V	P	N	C	N	V	V
Template Known Secondary structure			T									S	S											T	T	T			.	.	.	.	.									B			G	G	G	G	G	T		T	T			G	G	G	T	T	S	B													S	T	T
Template Predicted Secondary structure																													.	.	.	.	.
Template SS confidence
		2047	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.						.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.
		70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.																																					.
Query SS confidence							.	.	.	.	.																																					.
Query Sequence		K	T	L	D	R	.	.	.	.	.	R	E	A	L	K	D	A	D	F	V	T	T	Q	L	R	V	G	Q	L	P	A	R	E	L	D	E	R	I	P	L	S	H	G	Y	L	G	.	Q	E	T	N	G	A	G	G	L
Query Conservation							.	.	.	.	.																																					.
Alig confidence							.	.	.	.	.														.	.																						.
Template Conservation																									.	.
Template Sequence		P	H	F	N	K	I	Q	D	F	N	D	T	F	Y	R	Q	F	H	I	I	V	C	G	.	.	L	D	S	I	I	A	R	R	W	I	N	G	M	L	I	S	L	L	N	Y	E	D	G	V	L	D	P	S	S	I	V
Template Known Secondary structure					S		G	G	G	S							T		S						.	.		S															T					T	T				G	G	G
Template Predicted Secondary structure																									.	.
Template SS confidence
		2122	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.	.			.	.	.	.	.	2150	.	.	.	.	.	.	.	.	.	2160	.	.	.	.	.	.	.	.	.	2170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions