Job Description P17411 Confidence 96.40% Date Thu Jan 5 11:36:08 GMT 2012 Rank 237 Aligned Residues 115 % Identity 20% Template c2nacA_ PDB info PDB header:oxidoreductase(aldehyde(d),nad+(a)) Chain: A: PDB Molecule:nad-dependent formate dehydrogenase; PDBTitle: high resolution structures of holo and apo formate dehydrogenase Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	L	K	V	V	T	I	G	G	G	S	S	Y	T	P	E	L	L	E	G	F	I	K	R	Y	H	E	L	P	V	S	E	L	W	L	V	D	V	E	G	G	K	P	K	L	D	I	I	F	D	L	C	Q	R	M	I	D	N	A	G	V	P	M	K	L	Y	K	T	L	D	R	R	E	A	L	K	D	A	D
Query Conservation
Alig confidence																												.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	M	H	V	G	T	V	A	A	G	R	I	G	L	A	V	L	R	R	L	A	P	F	D	V	.	.	.	.	.	.	H	L	H	Y	T	D	R	H	R	L	P	E	S	V	E	K	E	L	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	W	H	A	T	R	E	D	M	Y	P	V	C	D
Template Known Secondary structure		T	T									S											G	G	G	T		.	.	.	.	.	.							S	S											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S					G	G	G		S
Template Predicted Secondary structure																												.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.															.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	T	T	Q	L	R	V	G	Q	L	P	A	R	E	L	D	E	R	I	P	L	S	H	G	Y	L	G	Q	E	T	N	G	A	G	G	L	F	K	G	L	R	T	I	P	V	I	F	D	I	V	K	D	V	E	E	L	C	P	N	A	W	V	I	N	F	T	N	P	A	G	M	V	T	E	A	V	Y	R	H
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	T	L	N	C	P	.	.	.	.	.	.	.	.	.	.	.	L	H	P	E	T	E	H	M	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	T	L	K	L	F	K	R	G	A	Y	I	V	N	T	A	R	G	K	L	C	D	R	D	A	V	A	R	A
Template Known Secondary structure							S		.	.	.	.	.	.	.	.	.	.	.			T	T	T	T	T		B	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S		T	T							S		G	G	G	B
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.												.	.	.	260	.	.	.	.	.	.																							.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		163	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	F	K	R	F	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	S	G	R	L	A	G
Template Known Secondary structure				T	T	S
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions