Job Description P17411 Confidence 97.45% Date Thu Jan 5 11:36:08 GMT 2012 Rank 165 Aligned Residues 114 % Identity 17% Template c2g5cD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from aquifex aeolicus Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	V	T	I	G	G	G	S	S	Y	T	P	E	L	L	E	G	F	I	K	R	Y	H	E	L	P	V	S	E	L	W	L	V	D	V	E	G	G	K	P	K	L	D	I	I	F	D	L	C	Q	R	M	I	D	N	A	G	V	P	M	K	L	Y	K	T	L	D	R	R	E	A	L	K	D	A	D	F	V	T
Query Conservation
Alig confidence																										.	.	.	.										.	.									.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.										.	.									.	.	.	.	.	.	.	.	.
Template Sequence		N	V	L	I	V	G	V	G	F	X	G	G	S	F	A	K	S	L	R	R	S	G	F	K	.	.	.	.	G	K	I	Y	G	Y	D	I	N	.	.	P	E	S	I	S	K	A	V	.	.	.	.	.	.	.	.	.	D	L	G	I	I	D	E	G	T	T	S	I	A	K	V	E	D	F	S	P	D	F	V	X
Template Known Secondary structure							S		S													T	T			.	.	.	.	S							S		.	.									.	.	.	.	.	.	.	.	.		T	T	S		S				S		G	G	G	G	G	G	G			S
Template Predicted Secondary structure																										.	.	.	.										.	.									.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.										.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		T	Q	L	R	V	G	Q	L	P	A	R	E	L	D	E	R	I	P	L	S	H	G	Y	L	G	Q	E	T	N	G	A	G	G	L	F	K	G	L	R	T	I	P	V	I	F	D	I	V	K	D	V	E	E	L	C	.	P	N	A	W	V	I	N	F	T	N	P	A	G	M	V	T	E	A	V	Y	R	H	T	G
Query Conservation																																																									.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	R	T	F	R	E	I	A	K	K	L	S	Y	I	L	S	E	D	A	T	V	T	D	Q	G	S	V	K	G	K	L	V	Y	D	L	E	N	I	L	G
Template Known Secondary structure				S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G												S		T	T								S			T											G
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.																																					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		165	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	R	F	I	G	V
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		K	.	R	F	V	G	G
Template Known Secondary structure		G	.	G
Template Predicted Secondary structure			.
Template SS confidence
		141		.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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