Return to main results Retrieve Phyre Job Id

Job DescriptionP17411
Confidence95.15%DateThu Jan 5 11:36:08 GMT 2012
Rank335Aligned Residues79
% Identity13%Templatec2eggA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  QKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKPKLDIIFDLCQRMIDNAGVPMKLYKTLDRREALKDAD
Query Conservation 
  

 





          
     
   

 
 


     
  
                
  


   

  

Alig confidence 


























.....







..







......























Template Conservation    
 











   

   
  ..... 
 
 


..  

  

......                       
Template Sequence  DGKRILVIGAGGGARGIYFSLLSTAAE. . . . . RIDMANRT. . VEKAERLV. . . . . . REGDERRSAYFSLAEAETRLAEYD
Template Known Secondary structure  TT


STTT
S.....
SS........S
SSS


TGGG
S
Template Predicted Secondary structure 








.....

........











Template SS confidence 















































































   140.........150.........160...... ...170.... .....180.. .......190.........200......
 
   83......90....
Predicted Secondary structure 







Query SS confidence 











Query Sequence  FVTTQLRVGQLP
Query Conservation 


 
  


  
Alig confidence 











Template Conservation 





  
   
Template Sequence  IIINTTSVGMHP
Template Known Secondary structure 
S
TT
SS
Template Predicted Secondary structure 








Template SS confidence 











   207..210........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions