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Job DescriptionP17411
Confidence100.00%DateThu Jan 5 11:36:08 GMT 2012
Rank39Aligned Residues299
% Identity18%Templatec2e37B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:l-lactate dehydrogenase; PDBTitle: structure of tt0471 protein from thermus thermophilus
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  LKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKPKLDIIFDLCQRMIDNAGVPMKLYKTLDRREALKDADFV
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Template Sequence  XKVGIVGSGXVGSATAYALALLGVAR. . . . EVVLVDLDRKLAQAHAEDILHATPFAHP. . . . . VWVRAGSYGDLEGARAV
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STT

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GGGGTT
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Query Sequence  TTQLRVGQLPARELDERIPLSHGYLGQETNGAGGLFKGLRTIPVIFDIVKDVEELCPNAWVINFTNPAGMVTEAVYRHTG
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Template Sequence  VLAA. . . . . . . . . . . . . . . . . . . . . . . . . . GVARLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVXTQVAYRLSG
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TT

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   72... ....80.........90.........100.........110.........120.....
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  FKRFIGVCNIPIGMKMFIRDVLMLKDSDDLSIDLFGLNHMVFIKDVLINGKSRFAELLDGVASGQLKASSVKNIFDLPFS
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Template Sequence  LPP. . . . . . . . . . . . GRVVGSGTILDTARFRALLA. . . . . . . . . . . . . . . . . . . . . EYLRVAPQSVHAYVLGEHGDSEVL
Template Known Secondary structure  S
G............GG
TT.....................TS
GGGBSSSTT
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   132.. .....140.........150.... .....160.........170........
 
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Query Sequence  EGLIRSLNLLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFELYKNPELKVKPKELEQRGGAYYSDA. . AC
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Template Sequence  VWSSAQVGGVPLLEFA. . . . . . . . . . . . . . . . . . . . . . EARGRALSPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLA
Template Known Secondary structure  TT......................T



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   179180.........190.... .....200.........210.........220.........230......
 
   323......330.........340.........350.........360.........370.........380.........390......
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Query Sequence  EVINAIYNDKQAEHYVNIPHHGQIDNIPADWAVEMTCKLGRDGATPHPRITHFDDKVMGLIHTIKGFEIAASNA
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Template Sequence  RLVRAILTDEKGVYTVSAFTPEV. EGV. LEVSLSLPRILGAGGVEGTV. YPSLSPEEREALRRSAEILKEAAFA
Template Known Secondary structure  TT

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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