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Job DescriptionP17411
Confidence98.11%DateThu Jan 5 11:36:08 GMT 2012
Rank138Aligned Residues121
% Identity16%Templatec2d3tB_
PDB info PDB header:lyase, oxidoreductase/transferaseChain: B: PDB Molecule:fatty oxidation complex alpha subunit; PDBTitle: fatty acid beta-oxidation multienzyme complex from2 pseudomonas fragi, form v
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.. .......70...
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Query Sequence  KVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKPKLDIIFDLCQRMIDNA. . . . . . . . . . . . GVPMKLYKTLD
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Template Sequence  QAAVLGAGIMGGGIAYQSASKGT. . . . . . PILMKDIN. . EHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLS
Template Known Secondary structure  S

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   316...320.........330........ .340...... ...350.........360.........370.........380.......
 
   74.....80.........90.........100.........110.........120.........130.........140 .........150..
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Query Sequence  RREALKDADFVTTQLRVGQLPARELDERIPLSHGYLGQETNGAGGLFKGLRTIPVIFDIVKDVEELC. PNAWVINFTNPA
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Template Sequence  YGD. FGNVDLVVEAV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VENPKVKQAVLAEVENHVREDAILA. . SNTS
Template Known Secondary structure  GGG.GGG
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S
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   388.390 .........400. ........410.........420...... ...430
 
   153......160...... ...170.
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Query Sequence  GMVTEAVYRHTGFK. RFIGV
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Template Sequence  TISISLLAKALKRPENFVGM
Template Known Secondary structure  SS
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   431........440.........450
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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