Job Description P17411 Confidence 98.44% Date Thu Jan 5 11:36:08 GMT 2012 Rank 123 Aligned Residues 122 % Identity 17% Template c1zcjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:peroxisomal bifunctional enzyme; PDBTitle: crystal structure of 3-hydroxyacyl-coa dehydrogenase Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.										.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.
Query Sequence		K	V	V	T	I	G	G	G	S	S	Y	T	P	E	L	L	E	G	F	I	K	R	Y	H	E	L	P	V	S	E	L	W	L	V	D	V	E	G	G	K	P	K	L	D	I	I	F	D	L	C	Q	.	.	.	.	.	.	.	.	.	R	M	I	D	N	A	G	V	P	M	K	L	Y	K	T	L	D	R	R	E
Query Conservation																																																					.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.											.												.	.	.	.	.	.	.	.	.																				.
Template Conservation																									.	.	.	.	.	.											.																																								.
Template Sequence		S	V	G	V	L	G	L	G	T	M	G	R	G	I	A	I	S	F	A	R	V	G	I	.	.	.	.	.	.	S	V	V	A	V	E	S	D	P	K	.	Q	L	D	A	A	K	K	I	I	T	F	T	L	E	K	E	A	S	R	A	H	Q	N	G	Q	A	S	A	K	P	K	L	R	F	S	S	S	T	K	.
Template Known Secondary structure									S												T	T	T		.	.	.	.	.	.							S	S			.																							T	T												S		G	G	.
Template Predicted Secondary structure																									.	.	.	.	.	.											.																																								.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320							.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		A	L	K	D	A	D	F	V	T	T	Q	L	R	V	G	Q	L	P	A	R	E	L	D	E	R	I	P	L	S	H	G	Y	L	G	Q	E	T	N	G	A	G	G	L	F	K	G	L	R	T	I	P	V	I	F	D	I	V	K	D	V	E	E	L	C	.	P	N	A	W	V	I	N	F	T	N	P	A	G	M	V
Query Conservation																																																																		.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.							.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template Sequence		E	L	S	T	V	D	L	V	V	E	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	D	M	N	L	K	K	K	V	F	A	E	L	S	A	L	C	K	P	G	A	F	L	C	.	.	T	N	T	S	A	L	N
Template Known Secondary structure		G	G	T	T		S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S																S		T	T					.	.				S	S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.																																			.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.			.	.	.	410	.	.	.
		156	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		T	E	A	V	Y	R	H	T	G	F	K	.	R	F	I	G	V
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		V	D	D	I	A	S	S	T	D	R	P	Q	L	V	I	G	T
Template Known Secondary structure							T	T	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions