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Job DescriptionP17411
Confidence91.29%DateThu Jan 5 11:36:08 GMT 2012
Rank429Aligned Residues107
% Identity21%Templatec1vl6C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:malate oxidoreductase; PDBTitle: crystal structure of nad-dependent malic enzyme (tm0542) from2 thermotoga maritima at 2.61 a resolution
Resolution2.61 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKPKLDIIFDLCQRMIDNAGVPMKLYKTLDRREALKDA
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Template Sequence  IEEVKVVVNGIGAAGYNIVKFLLDLGVK. . . . . NVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGA
Template Known Secondary structure  GGG


ST
S.....TT

TTSGGG
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   178.180.........190.........200..... ....210.........220.........230.........240.........250..
 
   82.......90.........100.........110.........120.........130.........140.........150.
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Query Sequence  DFVTTQLRVGQLPARELDERIPLSHGYLGQETNGAGGLFKGLRTIPVIFDIVKDVEELCPNAWVINFTNP
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Template Sequence  DFFIGVSRGNILK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PEWIKKXSRKPVIFALANP
Template Known Secondary structure  S
S
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S
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   253......260..... ....270.........280....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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