Job Description P17411 Confidence 100.00% Date Thu Jan 5 11:36:08 GMT 2012 Rank 5 Aligned Residues 421 % Identity 25% Template c1obbB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-glucosidase; PDBTitle: alpha-glucosidase a, agla, from thermotoga maritima in2 complex with maltose and nad+ Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	V	V	T	I	G	G	G	S	S	Y	T	P	E	L	L	E	G	F	I	K	R	Y	H	E	L	P	V	S	E	L	W	L	V	D	V	E	G	G	K	P	K	L	D	I	I	F	D	L	C	Q	R	M	I	D	N	A	G	V	P	M	K	L	Y	K	T	L	D	R	R	E	A	L	K	D	A	D	F	V
Query Conservation
Alig confidence																																								.	.
Template Conservation																																								.	.
Template Sequence		V	K	I	G	I	I	G	A	G	S	A	V	F	S	L	R	L	V	S	D	L	C	K	T	P	G	L	S	G	S	T	V	T	L	M	D	I	D	.	.	E	E	R	L	D	A	I	L	T	I	A	K	K	Y	V	E	E	V	G	A	D	L	K	F	E	K	T	M	N	L	D	D	V	I	I	D	A	D	F	V
Template Known Secondary structure								T	T	T														T		G	G	G	T	T								S		.	.																			T									S							T	T		S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.					.	.
Query SS confidence																												.	.	.	.					.	.
Query Sequence		T	T	Q	L	R	V	G	Q	L	P	A	R	E	L	D	E	R	I	P	L	S	H	G	Y	L	G	.	.	.	.	Q	E	T	N	.	.	G	A	G	G	L	F	K	G	L	R	T	I	P	V	I	F	D	I	V	K	D	V	E	E	L	C	P	N	A	W	V	I	N	F	T	N	P	A	G	M	V	T	E	A
Query Conservation																												.	.	.	.					.	.
Alig confidence																												.	.	.	.					.	.
Template Conservation
Template Sequence		I	N	T	A	M	V	G	G	H	T	Y	L	E	K	V	R	Q	I	G	E	K	Y	G	Y	Y	R	G	I	D	A	Q	E	F	N	M	V	S	D	Y	Y	T	F	S	N	Y	N	Q	L	K	Y	F	V	D	I	A	R	K	I	E	K	L	S	P	K	A	W	Y	L	Q	A	A	N	P	I	F	E	G	T	T	L
Template Known Secondary structure							T	T															T	T		T	T		T	T		B	T	T	B			T	T			S	S	S																				T	T	S						S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		V	Y	R	H	T	G	F	K	R	F	I	G	V	C	N	I	P	I	G	M	K	M	F	I	R	D	V	L	M	L	K	D	S	D	D	L	S	I	D	L	F	G	L	N	H	M	V	F	I	K	D	V	L	I	N	G	K	S	R	F	A	E	L	L	D	G	V	A	S	.	.	G	Q	L	K	A	S	S	V	K
Query Conservation																																																																							.	.
Alig confidence									.														.	.								.																																							.	.
Template Conservation									.														.	.								.
Template Sequence		V	T	R	T	V	P	I	.	K	A	V	G	F	H	G	H	Y	G	V	M	E	.	.	I	V	E	K	L	G	L	.	E	E	E	K	V	D	W	Q	V	A	G	V	N	H	G	I	W	L	N	R	F	R	Y	N	G	G	N	A	Y	P	L	L	D	K	W	I	E	E	K	S	K	D	W	K	P	E	N	P	F
Template Known Secondary structure						S		S	.							G	G	G					.	.						T		.		G	G	G									T	T										T	T															G	G	G				S	S	T	T
Template Predicted Secondary structure									.														.	.								.
Template SS confidence
		162	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	F	D	L	P	F	S	E	G	L	I	R	S	L	N	L	L	P	C	S	Y	L	.	.	.	.	.	L	Y	Y	F	K	Q	K	E	M	L	A	I	E	M	G	E	Y	Y	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	D	Q	L	S	P	A	A	I	D	M	Y	R	F	Y	G	V	M	P	I	G	D	T	V	R	N	S	S	W	R	Y	H	R	D	L	E	T	K	K	K	W	Y	G	E	P	W	G	G	A	D	S	E	I	G	W	K	W	Y	Q	D	T	L	G	K	V	T	E	I	T	K	K	V	A	K	F	I	K	E	N	P
Template Known Secondary structure				T	T	S											S	S				G	G	G	G	T				G	G	G	G	S	S										T	T	T		S	T	T	S																												S	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	R	A	Q	V	V	Q	K	V	E	K	Q	L	F	E	L	Y	K	N	P	E	L	K	V	K	P	K	E	L	E	Q	R	G	G	A	Y	Y	S	D	A	A	C	E	V	I	N	A	I	Y	N	D	K	Q	A	E	H	Y	V	N	I	P	H	H	G	Q	I	D	N	I	P	A	D	W	A	V	E	M	T	C
Query Conservation
Alig confidence																																					.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		S	V	R	L	S	D	L	G	S	V	L	G	K	D	L	S	E	K	Q	F	V	L	E	V	E	K	I	L	D	P	E	R	K	S	G	.	.	.	.	E	Q	H	I	P	F	I	D	A	L	L	N	D	N	K	A	R	F	V	V	N	I	P	N	K	G	I	I	H	G	I	D	D	D	V	V	V	E	V	P	A
Template Known Secondary structure		T	S		G	G	G	G	G	G	G	S	T	T																S		S	S				.	.	.	.		S																							T	T	S	S	T	T	S		T	T	S
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.					.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.		.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.							430	.
Predicted Secondary structure																.									.																																																	.	.	.	.	.	.
Query SS confidence																.									.																																																	.	.	.	.	.	.
Query Sequence		K	L	G	R	D	G	A	T	P	H	P	R	I	T	.	H	F	D	D	K	V	M	G	.	L	I	H	T	I	K	G	F	E	I	A	A	S	N	A	A	L	S	G	E	F	N	D	V	L	L	A	L	N	L	S	P	L	V	H	S	D	R	D	A	E	L	L	A	R	E	M	I	.	.	.	.	.	.	L	A
Query Conservation																.									.																																																	.	.	.	.	.	.
Alig confidence													.			.									.																																																	.	.	.	.	.	.
Template Conservation													.
Template Sequence		L	V	D	K	N	G	I	H	P	E	K	.	I	E	P	P	L	P	D	R	V	V	K	Y	Y	L	R	P	R	I	M	R	M	E	M	A	L	E	A	F	L	T	G	D	I	R	I	I	K	E	L	L	Y	R	D	P	R	T	K	S	D	E	Q	V	E	K	V	I	E	E	I	L	A	L	P	E	N	E	E	M
Template Known Secondary structure					T	T							.		S	S										T																														S	T	T																T	S	G	G	G
Template Predicted Secondary structure													.
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.		.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
		432	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	K	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	H	Y	L
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		474	.	.	.	.