Job Description P0AD49 Confidence 99.96% Date Thu Jan 5 11:20:01 GMT 2012 Rank 3 Aligned Residues 95 % Identity 38% Template c2rqlA_ PDB info PDB header:translation Chain: A: PDB Molecule:probable sigma-54 modulation protein; PDBTitle: solution structure of the e. coli ribosome hibernation2 promoting factor hpf Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	M	N	I	T	S	K	Q	M	E	I	T	P	A	I	R	Q	H	V	A	D	R	L	A	K	L	E	K	W	Q	T	H	L	I	N	P	H	I	I	L	S	K	E	P	Q	G	F	V	A	D	A	T	I	N	T	P	N	G	V	L	V	A	S	G	K	H	E	D	M	Y	T	A	I	N	E	L	I	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	Q	L	N	I	T	G	N	N	V	E	I	T	E	A	L	R	E	F	V	T	A	K	F	A	K	L	E	Q	Y	F	D	R	I	N	Q	V	Y	V	V	L	K	V	E	K	V	T	H	T	S	D	A	T	L	H	V	N	G	G	E	I	H	A	S	A	E	G	Q	D	M	Y	A	A	I	D	G	L	I	D	K
Template Known Secondary structure										S	S																			T	T					S										S	S											T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	R	Q	L	N	K	L	Q	H	K	G	E	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	R	Q	L	T	K	H	K	D	K	L	K	Q	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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