 |
Job Description | P0ADY1 | Confidence | 6.34% | Date | Thu Jan 5 11:22:05 GMT 2012 |
Rank | 86 | Aligned Residues | 37 |
% Identity | 11% | Template | d1stza1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Heat-inducible transcription repressor HrcA, N-terminal domain
|
Resolution | 2.20 |
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Q | Q | V | L | N | R | L | I | D | E | A | L | . |
. |
. |
. |
. |
. |
. |
L | D | Q | Y | A | R | E | L | K | L | G | I | S | D | E | Q | V | K | Q | A | I | F | A | T |
Query Conservation |   |
  |   |   |
|
|   |   |
|
|   |   |   |
| . | . | . | . | . | . | . |
|   |   |   |
|   |   |   |
|
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|   |   |   |   |   |
|
|   |   |
|
|
|   |   |
|   |   |
|
Template Sequence |   |
Q | R | K | V | L | Y | C | I | V | R | E | Y | I | E | N | K | K | P | V | S | S | Q | R | V | L | E | V | S | N | I | E | F | S | S | A | T | I | R | N | D | M | K | K | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
| B |
|  |  |  |  |  |  |  | S |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|