Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADY1
Confidence6.03%DateThu Jan 5 11:22:05 GMT 2012
Rank92Aligned Residues54
% Identity17%Templatec2ytcA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:pre-mrna-splicing factor rbm22; PDBTitle: solution structure of rna binding domain in pre-mrna-2 splicing factor rbm22
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   242.......250.........260 .........270.........280.........290.....
Predicted Secondary structure 






..









Query SS confidence 


















. .


































Query Sequence  TMQQPVSDADIQSYYDQHQ. . DQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDF
Query Conservation       
   

   
    ..             
       
      
  
  
Alig confidence 


















..


































Template Conservation 

    
   
   
   
 
           


 
     
  
          
Template Sequence  GLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIV
Template Known Secondary structure 

TTTS
TTS
GGGTSSTTTTT
Template Predicted Secondary structure 





















Template SS confidence 























































   245....250.........260.........270.........280.........290.........300
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions