 |
Job Description | P0ADY1 | Confidence | 8.62% | Date | Thu Jan 5 11:22:05 GMT 2012 |
Rank | 46 | Aligned Residues | 51 |
% Identity | 6% | Template | c2jvoA_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:nucleolar protein 3; |
PDBTitle: segmental isotope labeling of npl3
|
Resolution | UNK |
|
 |
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | T | M | Q | Q | P | V | S | D | A | D | I | Q | S | Y | Y | D | Q | H | Q | D | Q | F | T | Q | P | Q | R | T | R | Y | S | I | I | Q | T | K | T | E | D | E | A | K | A | V | L | D | E | L | N | K |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
Template Sequence |   |
R | P | F | P | L | D | V | Q | E | S | E | L | N | E | I | F | G | P | F | G | P | M | K | E | V | K | I | L | N | G | F | A | F | V | E | F | E | E | A | E | S | A | A | K | A | I | E | E | V | H | G |
Template Known Secondary structure |   |
| S | S |
| T | T |
|
|  |  |  |  |  |  |  |  | T | T | T | S |
|
|
|  |  |  |  |  | T | T |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|