Job Description P0ADY1 Confidence 96.86% Date Thu Jan 5 11:22:05 GMT 2012 Rank 22 Aligned Residues 117 % Identity 17% Template c1w26B_ PDB info PDB header:chaperone Chain: B: PDB Molecule:trigger factor; PDBTitle: trigger factor in complex with the ribosome forms a2 molecular cradle for nascent proteins Resolution 2.7 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	S	R	G	Q	F	E	N	A	F	N	S	E	R	N	R	M	Q	Q	Q	L	G	D	Q	Y	S	E	L	A	A	N	E	G	Y	M	K	T	L	R	Q	Q	V	L	N	R	L	I	D	E	A	L	L	D	Q	Y	A	R	E	L	K	L	G	I	S	D	E	Q	V	K	Q	A	I	F	A	T	P	A	F	Q
Query Conservation
Alig confidence																															.	.																																																.	.
Template Conservation																															.	.																																																.	.
Template Sequence		D	V	P	A	A	L	I	D	S	E	I	D	V	L	R	R	Q	A	A	Q	R	F	G	G	N	E	K	Q	A	.	.	L	E	L	P	R	E	L	F	E	E	Q	A	K	R	R	V	V	V	G	L	L	L	G	E	V	I	R	T	N	E	L	K	A	D	E	E	R	V	K	G	L	I	E	E	X	A	S	.	.
Template Known Secondary structure																						T	S	S			T	T			.	.			S		G	G	G	T																					T	T																	T	.	.
Template Predicted Secondary structure																															.	.																																																.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.			330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	G	K	F	D	N	S	R	Y	N	G	I	L	N	Q	M	G	M	T	A	D	Q	Y	A	Q	A	L	R	N	Q	L	T	T	Q	Q	L	I	N	G	V	A	G	T	D	F	M
Query Conservation
Alig confidence		.																		.	.	.	.	.
Template Conservation		.																		.	.	.	.	.
Template Sequence		.	A	Y	E	D	P	K	E	V	I	E	F	Y	S	K	N	K	E	.	.	.	.	.	L	X	D	N	X	R	N	V	A	L	E	E	Q	A	V	E	A	V	L	A	K	A	K	V
Template Known Secondary structure		.	T	S	S											T				.	.	.	.	.																				T	T	S
Template Predicted Secondary structure		.																		.	.	.	.	.
Template SS confidence
			377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.						.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions