Job Description P0ADY1 Confidence 100.00% Date Thu Jan 5 11:22:05 GMT 2012 Rank 1 Aligned Residues 336 % Identity 22% Template c1m5yB_ PDB info PDB header:isomerase, cell cycle Chain: B: PDB Molecule:survival protein sura; PDBTitle: crystallographic structure of sura, a molecular chaperone2 that facilitates outer membrane porin folding Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	Y	A	A	K	V	N	D	Q	E	I	S	R	G	Q	F	E	N	A	F	N	S	E	R	N	R	M	Q	Q	Q	L	G	D	Q	Y	S	E	L	A	A	N	E	G	Y	M	K	T	L	R	Q	Q	V	L	N	R	L	I	D	E	A	L	L	D	Q	Y	A	R	E	L	K	L	G	I	S	D	E	Q	V	K
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.
Template Sequence		D	K	V	A	A	V	V	N	N	G	V	V	L	E	S	D	V	D	G	L	M	Q	S	V	K	L	N	A	A	Q	A	R	Q	Q	L	P	.	.	.	.	.	.	.	.	D	D	A	T	L	R	H	Q	I	M	E	R	L	I	M	D	Q	I	I	L	Q	M	G	Q	K	M	G	V	K	I	S	D	E	Q	L	D
Template Known Secondary structure									S	S	S																				T	T	T					.	.	.	.	.	.	.	.																										T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.									.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		Q	A	I	F	A	T	P	A	F	Q	V	D	G	K	F	D	N	S	R	Y	N	G	I	L	N	Q	M	G	M	T	A	D	Q	Y	A	Q	A	L	R	N	Q	L	T	T	Q	Q	L	I	N	G	V	A	G	T	D	F	.	M	L	K	G	E	T	D	E	L	A	A	L	V	A	Q	Q	R	V	V	R	E	A	T
Query Conservation																																																										.
Alig confidence							.	.	.																																																	.
Template Conservation							.	.	.
Template Sequence		Q	A	I	A	N	.	.	.	I	A	K	Q	N	N	M	T	L	D	Q	M	R	S	R	L	A	Y	D	G	L	N	Y	N	T	Y	R	N	Q	I	R	K	E	M	I	I	S	E	V	R	N	N	E	V	R	R	R	I	T	I	L	P	Q	E	V	E	S	L	A	Q	Q	T	E	L	N	L	S	H	I	L	I	P
Template Known Secondary structure							.	.	.					T	T														T																										T	T					T	T
Template Predicted Secondary structure							.	.	.
Template SS confidence
		98	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.																							.	.	.	.	.	.	.
Query SS confidence																																																			.	.																							.	.	.	.	.	.	.
Query Sequence		I	D	V	N	A	L	A	A	K	Q	P	V	T	E	Q	E	I	A	S	Y	Y	E	Q	N	K	N	N	F	M	T	P	E	Q	F	R	V	S	Y	I	K	L	D	A	A	T	M	Q	Q	P	.	.	V	S	D	A	D	I	Q	S	Y	Y	D	Q	H	Q	D	Q	F	T	Q	P	Q	R	.	.	.	.	.	.	.
Query Conservation																																																			.	.																							.	.	.	.	.	.	.
Alig confidence																																																			.	.																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	E	N	P	T	S	D	Q	V	N	E	A	E	S	Q	A	R	A	I	V	D	Q	A	R	N	G	A	D	F	G	K	L	A	I	A	H	S	A	D	Q	Q	A	L	N	G	G	Q	M	G	W	G	R	I	Q	E	L	P	G	I	F	A	Q	A	L	S	T	A	K	K	G	D	I	V	G	P	I	R	S	G
Template Known Secondary structure				S	S																						T	T													S	T	T	G	G	G	T	T							G	G	G	S						T	T	T	T	T			T	T									T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
																					269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.						290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	Y	S	I	I	Q	T	K	T	E	D	E	A	K	A	V	L	D	E	L	.	.	.	.	.	N	K	G	G	D	F	A	A	L	A	K	E	K	S	A	D	I	I	S	A	R	N	G	G	D	M	G	W	L	E	D	A	T	I	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation
Template Sequence		V	G	F	H	I	L	K	V	N	D	L	R	T	E	V	H	A	R	H	I	L	L	K	P	S	P	I	M	T	D	E	Q	A	R	V	K	L	E	Q	I	A	A	D	I	K	S	G	K	T	T	F	A	A	A	A	K	E	F	S	Q	D	P	G	S	A	N	Q	G	G	D	L	G	W	A	T	P	D	I	F	D
Template Known Secondary structure		T																								B	T	T	B																		T	T	S	S													T	T	T	T	T	T	T	T							G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		325	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		D	E	L	K	N	A	G	L	.	K	E	K	G	Q	L	S	G	V	I	K	S	S	V	G	F	L	I	V	R	L	D	D	I	Q	P	A	K	V	K	S	L	D	E	V	R	D	D	I	A	A	K	V	K	H	E	K	A	L	D	A	Y	Y	A	L	Q	Q	K	V	S	D	A	A	S
Query Conservation										.
Alig confidence										.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	F	R	D	A	L	T	R	L	N	K	G	Q	M	S	A	P	V	H	S	S	F	G	W	H	L	I	E	L	L	D	T	.	.	.	.	.	.	.	.	.	.	.	R	N	R	A	Y	R	M	L	M	N	R	K	F	S	E	E	A	A	S	W	M	Q	E	Q	R	A	S	A	Y
Template Known Secondary structure													T	T		B							T	T											.	.	.	.	.	.	.	.	.	.	.																											T	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.												.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions