Job Description P0A715 Confidence 40.25% Date Thu Jan 5 11:04:29 GMT 2012 Rank 475 Aligned Residues 177 % Identity 18% Template d1bxna1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.70

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.															.
Predicted Secondary structure																																		.	.	.																				.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.																				.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	R	G	P	G	L	E	E	G	M	K	I	F	Q	E	L	K	Q	T	F	G	V	K	I	I	T	D	V	H	E	P	S	.	.	.	Q	A	Q	P	V	A	D	V	V	D	V	I	Q	L	P	A	F	L	A	.	.	.	.	.	.	.	R	Q	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L
Query Conservation																																		.	.	.																				.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																										.	.	.																				.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.
Template Sequence		F	A	G	P	S	.	.	T	G	I	I	V	E	R	E	R	L	D	K	F	G	R	P	L	L	G	A	T	T	K	P	K	L	G	L	S	G	R	N	Y	G	R	V	V	Y	E	G	L	K	G	G	L	D	F	M	K	D	D	E	N	I	N	S	Q	P	F	M	H	W	R	D	R	F	L	F	V	M	D	A	V
Template Known Secondary structure						S	.	.	S										T			S	S								T	T		T	T																T	T		S						T	T		S	S		T	T	S
Template Predicted Secondary structure							.	.
Template SS confidence
		151	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		V	E	A	M	A	K	T	G	A	V	I	N	V	K	K	P	Q	F	.	V	S	P	G	Q	M	G	N	I	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C	D	R	G	A	N	F	G	Y	D	N	L	V	V	D	M	L	G	F	S	I	M	K	K	V	S	G	N	S	P	V	I	F	D	V	T	H	A
Query Conservation																				.
Alig confidence																				.																				.					.	.	.	.	.	.	.	.			.																						.
Template Conservation																																								.					.	.	.	.	.	.	.	.			.																						.
Template Sequence		N	K	A	S	A	A	T	G	E	V	K	G	S	Y	L	N	V	T	A	G	T	M	E	E	M	Y	R	R	A	E	F	A	K	S	L	G	S	V	.	I	I	M	V	.	.	.	.	.	.	.	.	D	L	.	I	V	G	W	T	C	I	Q	S	M	S	N	W	C	R	Q	N	D	M	I	L	.	H	L	H	R
Template Known Secondary structure									T	S											S	S														T	T		S	.					.	.	.	.	.	.	.	.		G	.	G	G														T	T	T				.
Template Predicted Secondary structure																																								.					.	.	.	.	.	.	.	.			.																						.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270									.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	C	R	D	P	F	G	A	A	S	G	G	R	R	A	Q	V	A	E	L	A	R	A	G	M	A	V	G	L	A	G	L	F	I	E	A	H	P	D	P	E	H	A	K	C	D	G	P	S	A	L	P	L	A	K	L	E	P	F	L	K	Q	M	K
Query Conservation
Alig confidence																				.	.																			.	.	.	.	.	.	.	.
Template Conservation																				.	.																			.	.	.	.	.	.	.	.
Template Sequence		A	G	H	G	T	Y	T	R	Q	K	N	H	G	V	S	F	R	V	.	.	I	A	K	W	L	R	L	A	G	V	D	H	M	H	T	G	T	A	.	.	.	.	.	.	.	.	V	G	K	L	E	G	D	P	L	T	V	Q	G	Y	Y	N	V	C	R
Template Known Secondary structure		T	T	T					S		T	T	S	S						.	.									T		S							T	.	.	.	.	.	.	.	.	T	S	S	T	T
Template Predicted Secondary structure																				.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.			.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.									.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions