Job Description P0A715 Confidence 39.59% Date Thu Jan 5 11:04:29 GMT 2012 Rank 479 Aligned Residues 170 % Identity 16% Template d1bwva1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.40

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.											100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.															.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.										.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.										.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	E	E	G	M	K	I	F	Q	E	L	K	Q	T	F	G	V	K	I	I	T	D	V	H	E	P	.	.	.	.	.	.	.	.	.	.	S	Q	A	Q	P	V	A	D	V	.	V	D	V	I	Q	L	P	A	F	L	A	R	Q	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	E	A
Query Conservation																													.	.	.	.	.	.	.	.	.	.										.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.										.						.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.
Template Sequence		G	P	A	T	G	V	I	L	E	R	E	R	L	D	K	F	G	R	P	L	L	G	C	T	T	K	P	K	L	G	L	S	G	K	N	Y	G	R	V	V	Y	E	A	L	K	G	G	L	D	F	V	D	.	.	D	E	N	I	N	S	Q	P	F	M	R	W	R	E	R	Y	L	F	T	M	E	A	V	N	K	A
Template Known Secondary structure				S	S										T			S	S								S	S	S	S																		T		S	B			.	.		T	T		S	S	B	T	T	B
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.		.	.
Predicted Secondary structure																	.																																																.	.													.
Query SS confidence																	.																																																.	.													.
Query Sequence		M	A	K	T	G	A	V	I	N	V	K	K	P	Q	F	.	V	S	P	G	Q	M	G	N	I	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C	D	R	G	A	N	F	G	Y	D	N	L	V	V	D	M	L	G	F	S	I	M	K	K	.	.	V	S	G	N	S	P	V	I	F	D	V	T	.	H	A
Query Conservation																	.																																																.	.													.
Alig confidence																	.																				.					.	.	.	.	.	.	.	.			.													.	.													.
Template Conservation																																					.					.	.	.	.	.	.	.	.			.
Template Sequence		S	A	A	T	G	E	V	K	G	H	Y	L	N	V	T	A	A	T	M	E	E	M	Y	A	R	A	N	F	A	K	E	L	G	S	V	.	I	I	M	I	.	.	.	.	.	.	.	.	D	L	.	V	I	G	Y	T	A	I	Q	T	M	A	K	W	A	R	D	N	D	M	I	L	H	L	H	R	A	G	N	S
Template Known Secondary structure						T	S			B								S	S														T	T		S	.					.	.	.	.	.	.	.	.		G	.	G	G															T	T								T	T	T
Template Predicted Secondary structure																																					.					.	.	.	.	.	.	.	.			.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.									.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	C	R	D	P	F	G	A	A	S	G	G	R	R	A	Q	V	A	E	L	A	R	A	G	M	A	V	G	L	A	G	L	F	I	E	A	H	P	D	P	E	H	A	K	C	D	G	P	S	A	L	P	L	A	K	L	E	P	F	L	K	Q	M	K
Query Conservation
Alig confidence			.	.	.	.														.	.																			.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.														.	.																			.	.	.	.	.	.	.	.
Template Sequence		T	.	.	.	.	Y	S	R	Q	K	N	H	G	M	N	F	R	V	.	.	I	C	K	W	M	R	M	A	G	V	D	H	I	H	A	G	T	V	.	.	.	.	.	.	.	.	V	G	K	L	E	G	D	P	I	I	T	R	G	F	Y	K	T	L	L
Template Known Secondary structure			.	.	.	.			S		T	T	S	S						.	.									T		S							S	.	.	.	.	.	.	.	.	S	S	S	S
Template Predicted Secondary structure			.	.	.	.														.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		300					.	.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.									.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions