Job Description P0A715 Confidence 89.74% Date Thu Jan 5 11:04:29 GMT 2012 Rank 215 Aligned Residues 85 % Identity 15% Template c3tdmD_ PDB info PDB header:de novo protein Chain: D: PDB Molecule:computationally designed two-fold symmetric tim-barrel PDBTitle: computationally designed tim-barrel protein, halfflr Resolution 2.40 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.
Predicted Secondary structure																																																											.	.															.
Query SS confidence																																																											.	.															.
Query Sequence		C	E	H	Y	V	T	V	T	Q	K	L	G	I	P	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	E	G	M	K	I	F	Q	E	L	K	Q	T	F	G	V	K	I	I	T	.	.	D	V	H	E	P	S	Q	A	Q	P	V	A	D	V	.	V	D	V	I	Q	L
Query Conservation																																																											.	.															.
Alig confidence																																.	.	.	.	.	.	.	.	.																			.	.															.
Template Conservation																																.	.	.	.	.	.	.	.	.
Template Sequence		L	R	D	W	V	V	E	V	E	K	R	G	A	G	E	I	L	L	T	S	I	D	R	D	G	T	K	S	G	Y	.	.	.	.	.	.	.	.	.	D	T	E	M	I	R	F	V	R	P	L	T	T	L	P	I	I	A	S	G	G	A	G	K	M	E	H	F	L	E	A	F	L	R	G	A	D	K	V	S	I
Template Known Secondary structure												T	T		S							S	S	S		S	S	S	S			.	.	.	.	.	.	.	.	.									G	G	G			S						S				S										T	T		S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.										.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	F	L	A	R	Q	T	D	L	V	E	A	M	A	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	A	A	V	E	N	P	S	L	I	T	Q	I	A	Q	T
Template Known Secondary structure		S							T								T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions