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Job DescriptionP0A715
Confidence100.00%DateThu Jan 5 11:04:29 GMT 2012
Rank15Aligned Residues251
% Identity42%Templatec3t4cD_
PDB info PDB header:transferaseChain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  VSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELK
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Template Sequence  MKLYDFEVGLDQPFFLIAGTCVVESEQMTIDTAGRLKEICAKL. . . . . . . . . . . . . . . NVPFIYKSSM. DEGLRILGEVK
Template Known Secondary structure  TTSTTS

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Query Sequence  QTFGVKIITDVHEPSQAQPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKE. . . . . . GG
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Template Sequence  RQLGLPVLTDVHSIDEIEQVASVVDVLQTPAFLCRQTDFIHACARSGKPVNIKKGQFLAPHDMKNVIDKAREAAREAGLS
Template Known Secondary structure  T



STT
S
GGGTT
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Query Sequence  NEKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGLAGLFIE
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Template Sequence  EDRFMACERGVSFGYNNLVSDMRSLAIMRETS. . APVVFDATHSVQLP. . . . . . . . GQREFVPVLARAAVATGVAGLFME
Template Known Secondary structure  S




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   161........170.........180.........190.. .......200...... ...210.........220.........230
 
   240.........250.........260.........270.........280..
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Query Sequence  AHPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKGFEELDT
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Template Sequence  THPNPAEAKSDGPNAVPLNRMGALLETLVTLDQAVKRHPFLEN
Template Known Secondary structure  S
TTT

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   239240.........250.........260.........270.........280.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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