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Job DescriptionP0A715
Confidence100.00%DateThu Jan 5 11:04:29 GMT 2012
Rank4Aligned Residues256
% Identity66%Templatec3sz8D_
PDB info PDB header:transferaseChain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  IGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQT
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Template Sequence  SPGVTAGNSLPFVLFGGINVLESLDFTLDVCGEYVAVTRKLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKAR
Template Known Secondary structure  TT
TTS




T

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S
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   88.90.........100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  FGVKIITDVHEPSQAQPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNEKVILCD
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Template Sequence  FGVPVITDVHEAEQAAPVAEIADVLQVPAFLARQTDLVVAIAKAGKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCE
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SGGG
S
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   168.170.........180.........190.........200.........210.........220.........230.........240.......
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Query Sequence  RGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGLAGLFIEAHPDPEHA
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Template Sequence  RGSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTHSLQ. . . . . . . . . . . . . . . VLDLARAGIAVGIAGLFLEAHPDPDRA
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SSS


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   166...170.........180.........190.........200... ......210.........220.........230
 
   248.250.........260.........270.........280.
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Query Sequence  KCDGPSALPLAKLEPFLKQMKAIDDLVKGFEELD
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Template Sequence  RPS. . . ALPLHQLEGLLSQMKAIDDLVKRMPALE
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GGGTT




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   246.. .250.........260.........270......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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