Job Description P0A715 Confidence 82.87% Date Thu Jan 5 11:04:29 GMT 2012 Rank 280 Aligned Residues 203 % Identity 10% Template c3oixA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative dihydroorotate dehydrogenase; dihydroorotate PDBTitle: crystal structure of the putative dihydroorotate dehydrogenase from2 streptococcus mutans Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	V	S	I	G	D	I	N	V	A	N	D	L	P	F	V	L	F	G	G	M	N	V	L	E	S	R	D	L	A	M	R	I	C	E	H	Y	V	T	V	T	Q	K	L	G	I	P	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	A	S	F	D	K	A	N	R	S	S	I	H
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.													.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation													.	.													.	.	.	.	.	.	.	.	.																																								.	.
Template Sequence		T	H	T	T	I	G	S	F	D	F	D	.	.	N	C	L	M	N	A	A	G	V	Y	C	M	.	.	.	.	.	.	.	.	.	T	R	E	E	L	A	A	I	D	H	S	E	A	G	S	F	V	T	T	G	T	L	E	E	R	A	G	N	P	Q	P	R	Y	A	D	T	K	L	G	.	.	S	I	N	S	M
Template Known Secondary structure							T	T				S	.	.		S					T	T	S	S		S	.	.	.	.	.	.	.	.	.	S									T	S	S		S	B		B			B		S	S		B			S		S							S	S		.	.
Template Predicted Secondary structure													.	.													.	.	.	.	.	.	.	.	.																																								.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.										.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence																						.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		S	Y	R	G	P	G	L	E	E	G	M	K	I	F	Q	E	L	K	Q	T	.	F	G	V	K	I	I	T	D	V	H	E	P	S	Q	A	Q	P	V	A	D	V	V	D	V	I	Q	L	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	A	R	Q	T	D	L	V	E	A	M	A	.	.
Query Conservation																						.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence																						.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation
Template Sequence		G	L	P	N	L	G	I	N	Y	Y	L	D	Y	V	T	E	L	Q	K	Q	P	D	S	K	N	H	F	L	S	L	V	G	M	S	P	E	E	T	H	T	I	L	M	V	E	A	S	K	Y	Q	G	L	V	E	L	N	L	S	C	P	N	V	P	G	P	Q	I	A	Y	D	F	E	T	T	D	Q	I	L	S	E
Template Known Secondary structure					B	S															S	T	T											S	S										T	T	T	S	S			S							S				S					G	G	G
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																				.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	K	T	G	A	V	I	N	V	K	K	P	Q	F	V	S	P	G	Q	M	G	N	I	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C	D	R	G	A	N	F	G	Y	D	N	L	V	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	L	G	F	S	I	M
Query Conservation		.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.														.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		V	F	T	Y	F	T	K	P	L	G	I	K	L	P	P	Y	.	F	D	I	V	H	F	D	Q	A	A	A	I	F	N	Y	P	L	T	F	V	N	C	I	N	S	I	G	N	G	L	V	I	E	D	E	T	V	V	I	P	K	N	G	F	G	G	I	G	G	D	Y	V	K	P	T	A	L	A	N	V	H	A	F
Template Known Secondary structure			T	T	T			S										.																		S																T	T						G	G	G							G	G	G
Template Predicted Secondary structure																		.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		188	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		K	K	V	S	G	.	N	S	P	V	I	F	D	V	T	H	A	L	Q	C	R	D	P	F	G	A	A	S	G	G	R	R	A	Q	V	A	E	L	A	R	A	G	M	A	V	G	L	A	G	L	F	I
Query Conservation							.
Alig confidence							.											.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	K	R	L	N	P	S	I	Q	I	I	G	T	G	G	V	.	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	D	A	F	E	H	I	L	C	G	A	S	M	V	Q	I
Template Known Secondary structure			T	T	S		T	T	S						S			.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T		S
Template Predicted Secondary structure																		.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.																		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions